Pairwise Alignments

Query, 635 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N2E2

Subject, 751 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  472 bits (1214), Expect = e-137
 Identities = 250/552 (45%), Positives = 354/552 (64%), Gaps = 4/552 (0%)

Query: 77  ADRERLRQAAAVFDCTREGVLVTDRNGLIVHVNRAFMAITGYVRDEVLGQRPSLFKSGRH 136
           A  E+L   + VF+   EGV++TD NG+I  +N AF  ITGY RDEV+G+ P L  SGRH
Sbjct: 195 AAEEQLFLTSKVFENAIEGVMITDSNGIITEINGAFETITGYSRDEVIGKTPKLLNSGRH 254

Query: 137 GPDFYRDMFTSLDSQGEWSGEIWNRRKSGEIYPQWQTIRVIRDDSGEISHYVAVFSDISA 196
             DF+ +++ +L +QG W GEIWNRRK+G ++ +  +I  +  + G++  +VAVFSDIS 
Sbjct: 255 ERDFFENLWRALKTQGHWHGEIWNRRKNGTLFAEQTSISAVYGEDGQVRCFVAVFSDISL 314

Query: 197 IKDSEHELAYLAHHDPLTGLPNRLLFSDRTEQALASAQLHKRGCALLLLDLDHFKNINDS 256
           +K +E E+A LA HDPLT LPNR   +  ++Q +  A   K   ALLL+D+D FK+INDS
Sbjct: 315 LKQTEAEVAQLAWHDPLTRLPNRSKLTTISQQQIKLAANRKTRLALLLIDVDLFKHINDS 374

Query: 257 LGHNVGDELLKGVAERFRGLFAPGVTLARLGGDEFAVLVENCSQPGQAAALA--RRILDA 314
            GH  GD++L  ++ER   L     TLAR+GGDEF +L +   +      L+  +R  D 
Sbjct: 375 FGHLAGDKVLLSLSERLAALLGAEDTLARIGGDEFVLLTQVRRRDDIPVILSAIQRAFDT 434

Query: 315 LKEPLRFDDHALFINASIGISLFPGDALSAGQLLRNADSALFKAKSAGRDGYALYTEELT 374
             +    +  ++ ++ASIGI+++P D  +   LL+NAD+A+++AK  GR+ +A YTE++T
Sbjct: 435 SFDTS--EGESVRLSASIGIAVYPDDGDNPDTLLKNADAAMYRAKQQGRNRHAFYTEQMT 492

Query: 375 AHAQQRVEIAFELRRALQQQELRVHYQPVHDLATSRLIGVEALVRWEHPTRGLVSPAEFI 434
             + Q++ +   LR A++   L + YQP  +L T +LIGVEAL RW     G+VSPAEFI
Sbjct: 493 QSSMQQLRLQTALRGAVKNSALSLVYQPKINLRTRKLIGVEALCRWTDHELGVVSPAEFI 552

Query: 435 PIAERTGLIAQVDAWVMDQACRQMCQWQQAGVALSFVAVNVSSRLFARRELYDQVAQVLH 494
           P+AE  GL+ ++  WV+ +ACRQ   W+  G+    +AVNVS          D VA+VL 
Sbjct: 553 PVAESIGLMPEIGLWVLKEACRQARIWRDQGLNPGRMAVNVSGSQLTGDNFADSVARVLT 612

Query: 495 DTGLDPGCLELEVTESAVMDDPEVALEQMHRLRELGVRLAIDDFGTGYSSLLRLKRLPVQ 554
            TGL P  LELE+TES V+D+P  A++ M +LR +GV LA+DDFGTGYSSL  L++LP+ 
Sbjct: 613 QTGLSPDALELEITESVVLDNPASAIDTMDKLRGMGVSLALDDFGTGYSSLSYLRKLPLN 672

Query: 555 KLKIDQGFVAGLPWDEDDAAIVRVIIALAHSMGMQVHAEGIEQREQAAFLLGQACELGQG 614
           KLKIDQ FV  LP D+D  AI   IIA+  ++ + V AEG+E   QA FLL   C   QG
Sbjct: 673 KLKIDQSFVRELPTDQDSGAIAMAIIAMGEALKLGVIAEGVENETQAEFLLRLGCTEAQG 732

Query: 615 YWFGRPVAAAQL 626
           Y F RP+ A++L
Sbjct: 733 YLFARPLLASEL 744