Pairwise Alignments

Query, 635 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N2E2

Subject, 651 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  494 bits (1272), Expect = e-144
 Identities = 264/548 (48%), Positives = 347/548 (63%), Gaps = 1/548 (0%)

Query: 81  RLRQAAAVFDCTREGVLVTDRNGLIVHVNRAFMAITGYVRDEVLGQRPSLFKSGRHGPDF 140
           RL  A+AVF   REG++VTD  G +  VN AF  ITGY   E+ G    L KSGR    F
Sbjct: 88  RLNLASAVFSAAREGIVVTDLEGRVEAVNPAFCQITGYGEAELQGFNLRLLKSGRQDGAF 147

Query: 141 YRDMFTSLDSQGEWSGEIWNRRKSGEIYPQWQTIRVIRDDSGEISHYVAVFSDISAIKDS 200
           YR ++  L   G W GEIWNRRK+GE YPQW TI  +RD++ +   YV VF D+S I+ S
Sbjct: 148 YRQLWRDLLESGHWQGEIWNRRKNGETYPQWLTISTVRDEAHQPVSYVGVFLDLSPIRRS 207

Query: 201 EHELAYLAHHDPLTGLPNRLLFSDRTEQALASAQLHKRGCALLLLDLDHFKNINDSLGHN 260
           E +L +LAHHDPLT LPNR LF  R E AL+ +       A+L LDLD FK++NDSLGH 
Sbjct: 208 EQKLLHLAHHDPLTDLPNRTLFLARLEHALSLSAREGGSGAVLFLDLDRFKDVNDSLGHP 267

Query: 261 VGDELLKGVAERFRGLFAPGVTLARLGGDEFAVLVENCSQPGQAAALARRILDALKEPLR 320
            GD LL  VAER R       TLARLGGDEF +L+E  + P +AA +A ++L+ L  P R
Sbjct: 268 TGDRLLCAVAERLRPCLRESDTLARLGGDEFLLLLETAATPERAAVVAEKLLEQLAAPFR 327

Query: 321 FDDHA-LFINASIGISLFPGDALSAGQLLRNADSALFKAKSAGRDGYALYTEELTAHAQQ 379
            DD + +++ ASIGI L+P D  +A  L+++ADSAL++AK+AGR  +  Y+E  T  A  
Sbjct: 328 LDDRSEVYVGASIGICLYPADGDNATTLIQHADSALYQAKAAGRHTFRFYSEAQTRQADA 387

Query: 380 RVEIAFELRRALQQQELRVHYQPVHDLATSRLIGVEALVRWEHPTRGLVSPAEFIPIAER 439
           R+ +   LRR L+++E  ++YQP  DL T+ L GVEALVRW  P   LV PA FIP+AE 
Sbjct: 388 RLALEAALRRGLEKEEFLLYYQPQVDLRTASLEGVEALVRWRLPGGELVPPARFIPLAEE 447

Query: 440 TGLIAQVDAWVMDQACRQMCQWQQAGVALSFVAVNVSSRLFARRELYDQVAQVLHDTGLD 499
           TGLI  +  WV+ QACRQM QW   G+ +  VAVN+SSR F + +L  ++  +L +TGL 
Sbjct: 448 TGLILPLGEWVLRQACRQMQQWVARGLPIRRVAVNLSSRQFRQADLLQRINAILAETGLA 507

Query: 500 PGCLELEVTESAVMDDPEVALEQMHRLRELGVRLAIDDFGTGYSSLLRLKRLPVQKLKID 559
           P  LELE+TES +MD+      ++  L  +G+RLAIDDFGTGYSSL  LKR P+  LK+D
Sbjct: 508 PRYLELEITESLLMDNSAQVDAKLEALEAMGIRLAIDDFGTGYSSLSYLKRFPLHTLKLD 567

Query: 560 QGFVAGLPWDEDDAAIVRVIIALAHSMGMQVHAEGIEQREQAAFLLGQACELGQGYWFGR 619
           + F+  +  D   + IV  II L   + M + AEG+E  +Q   LL   C   QGY F  
Sbjct: 568 RSFIRDIADDPVSSNIVASIIELGQHLDMDILAEGVETDQQRGILLQNGCRTCQGYLFSH 627

Query: 620 PVAAAQLD 627
           P+ A +L+
Sbjct: 628 PLPAEELE 635