Pairwise Alignments

Query, 626 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  311 bits (796), Expect = 7e-89
 Identities = 197/630 (31%), Positives = 333/630 (52%), Gaps = 19/630 (3%)

Query: 5   FSHKILLAASGVVVLAFALFTLYNDYLQRNTIGSSLESSIEQSGDLTASSIQNWMSGRIL 64
           FS  + +A +   ++A    T   D  +      ++ES    +    A  I +W  G+ L
Sbjct: 21  FSVVVAIAVTAAALVAAGYQTFEKDSWR------AIESESRNTLQAHAKGIGDWFLGKQL 74

Query: 65  VLENLAQNIAHQGTAADLPGLVDQPALTSNFQFTYVGQANG-VFTQRPDAKMPDGYDPRQ 123
            L+ L + I        +P L  Q   + +F  +Y G   G +F Q P     D YDPR 
Sbjct: 75  ALKGLREEIERNPQLELVPHL-RQTLQSGSFGLSYYGNEQGEMFRQDPSLNTAD-YDPRV 132

Query: 124 RPWYKQAVTADKTMLTPPYLAA-VGGLVVTVALPVKHNGELLGVVGGDLSLETLVKIINS 182
           R WYK+A  A K + T PY++  +  LVVT+A PV++ G+L+GV   +L+L+ L+K + +
Sbjct: 133 RGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLA 192

Query: 183 VDFGGIGHAFLVSGDGQVIVSPDKDQVMKNLKDIYPGTPV-RIGKGIQD-----VELNGQ 236
           ++  G G+A LV+  G+++  P +D ++K  +++     + ++    +D     + ++G+
Sbjct: 193 IEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLSMDGR 252

Query: 237 DRILSFTPVTGLPNAEWYIGLSIDKAKAYAPLSQFRTSALIAMFVAVAAIALLLSLLIQV 296
           D++L    V    N +W + + +DK     PL+      +      +  +ALL S  +  
Sbjct: 253 DKVLMAEEVA---NTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTSWFVAR 309

Query: 297 LMRPLTTMGRAMQDIAQGEGDLTRRLVVQGKDEFAVLGGSFNQFVERIHASISEVSSATR 356
            +  L  +  A+ DIA+G+GDLTRRL V+ +DE  +L   FN+FV+R+H  +  V   + 
Sbjct: 310 QLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREVSV 369

Query: 357 QVHDLSQRVMTSSNASLVGSDEQSARTNSVAAAINQLGAATQEIARNAADASQHASGASE 416
            +   +     S+  +      Q      VA A+ ++ +AT EIA NA + +++A+ + +
Sbjct: 370 ALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQ 429

Query: 417 QADDGRQVVEKTIQAMTELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALN 476
             +DG   ++++ Q++ +L+Q+++ +   I  L    + I  IL  I+GI++QTNLLALN
Sbjct: 430 LGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALN 489

Query: 477 AAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQTS 536
           AAIEAARAGE GRGFAVVADEVR L+ RT  S EEI   I  LQ  +  AV+ M  S   
Sbjct: 490 AAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKL 549

Query: 537 SEESVEVANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQTAVVETLNMDVSHINLLNQQS 596
            E SV   NQ G  L ++++ I +I  M   +A+A EEQ+ V   +N++   +  ++ Q 
Sbjct: 550 VETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQL 609

Query: 597 VANLNETLKDCDALSQQANRLKQLVDSFKI 626
                ++++   +L   A  L + +  FK+
Sbjct: 610 AEEAQQSVQQAKSLHAMAQELNKEISRFKL 639