Pairwise Alignments

Query, 626 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

Subject, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  330 bits (845), Expect = 1e-94
 Identities = 208/629 (33%), Positives = 329/629 (52%), Gaps = 10/629 (1%)

Query: 3   LKFSHKILLAASGVVVLAFALFTLYNDYLQRNTIGSSLESSIEQSGDLTASSIQNWMSGR 62
           +KFSHKI+ A+S +++   AL +    +  R+ I S +  S+++  D  + +    ++GR
Sbjct: 1   MKFSHKIVAASSVLLLATVALLSGSQYFKVRDEIRSMVSDSVDEIVDGVSKTTAEVINGR 60

Query: 63  ILVLENLAQNIAHQGTAADLPGLVDQPALTSNFQFTYVGQANGVFTQRPDAKMPDG--YD 120
             + +     I +     ++  ++ QP + + F     G          D     G  +D
Sbjct: 61  KSIAQYATSLIENNPEPDNVRTIISQPLIKNTFLLVGFGLEKDGSNINNDPSWNPGPTWD 120

Query: 121 PRQRPWYKQAVTADKTMLTPPYL-AAVGGLVVTVALPVKHN--GELLGVVGGDLSLETLV 177
           PR RPWYK A  A K ++T PY  +A G ++V+VA PVK +  G+ LG +  D+SL  L 
Sbjct: 121 PRVRPWYKDAKNAGKLVITAPYADSASGEILVSVATPVKDSATGQFLGSIFYDVSLAELA 180

Query: 178 KIINSVDFGGIGHAFLVSGDGQVIVSPDKDQVMKNLKDIYPGTPVRIGKGIQDVELNGQD 237
           +++N V     G+ F+VS DG  I  P K+   K + +    + + +      V +NG+ 
Sbjct: 181 ELVNEVKLFDAGYVFIVSEDGTTIAHPKKEFNGKPMSEFLGESKINVDT--HQVIINGKP 238

Query: 238 RILSFTPVTGLPNAEWYIGLSIDKAKAYAPLSQFRTSALIAMFVAVAAIALLLSLLIQVL 297
             +SF+ V G    +WY+G+ ID+  AYA L + R S LI   +A+     +L  +++VL
Sbjct: 239 YAVSFSDVEG---EDWYVGVVIDEEIAYAALDELRRSTLIFTVIALVISVFVLLFIVRVL 295

Query: 298 MRPLTTMGRAMQDIAQGEGDLTRRLVVQGKDEFAVLGGSFNQFVERIHASISEVSSATRQ 357
           M+PL T+  A+Q++A GEGDLT+RL     +EFA L   FN F E +   + +  +   +
Sbjct: 296 MKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAE 355

Query: 358 VHDLSQRVMTSSNASLVGSDEQSARTNSVAAAINQLGAATQEIARNAADASQHASGASEQ 417
           +   S+    +   S      Q      +A A++++   + ++A NA  A+  A  A + 
Sbjct: 356 ILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAKVADDA 415

Query: 418 ADDGRQVVEKTIQAMTELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALNA 477
           A  G  VV KT +A+  LS  I  +   ++ L ++T NI  +L VI  I+ QTNLLALNA
Sbjct: 416 AAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTNLLALNA 475

Query: 478 AIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQTSS 537
           AIEAARAGE+GRGFAVVADEVR LA RTQ+S  EI  MI  LQ G+      M+ S+ ++
Sbjct: 476 AIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKDTA 535

Query: 538 EESVEVANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQTAVVETLNMDVSHINLLNQQSV 597
             +V  A  A   L  +   I +I  MN  +A+A EEQ+ V E +N +   I  L+ Q  
Sbjct: 536 ASAVNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQVA 595

Query: 598 ANLNETLKDCDALSQQANRLKQLVDSFKI 626
            + +E        ++       +++ FK+
Sbjct: 596 ESADEANMSMQIQTENIREQDAILNKFKV 624