Pairwise Alignments

Query, 662 a.a., Membrane bound c-di-GMP receptor LapD from Pseudomonas fluorescens FW300-N2E2

Subject, 657 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  682 bits (1760), Expect = 0.0
 Identities = 358/647 (55%), Positives = 458/647 (70%), Gaps = 2/647 (0%)

Query: 1   MSLFKQLLIAICLFLVVAFSGSFMVSLESSRAQYVNQLRSHAQDAATALALSLTPNIDDP 60
           MSL KQL +AICLFLVVAF+G F+ S+E+SR Q +NQLRSHAQDAATALALS+TP+ DDP
Sbjct: 1   MSLLKQLFLAICLFLVVAFTGGFIASVENSREQSINQLRSHAQDAATALALSMTPHADDP 60

Query: 61  AMVELMVSSIFDSGYYASIRVVDVATDRTLVERTGTPDAGSVPQWFVKLIGLEPAGGDAI 120
            M+EL+ +SIFDSGY++SIRV+ +  D  +VER        VP WF  ++ L P GGDA+
Sbjct: 61  VMLELLANSIFDSGYFSSIRVLRIPDDSPIVERNANIQLQQVPGWFATIVDLPPQGGDAL 120

Query: 121 VSRGWEQAARVEVVSHPMFALAKLWQSALGSLGWLLLCGAVSAVLGALLLRRQLKPLDYM 180
           + RGWEQAARVEV SHP FALAKLW S L +L WLL CGAVSA+LG  LLR QL+PLD M
Sbjct: 121 IMRGWEQAARVEVFSHPQFALAKLWDSTLATLLWLLACGAVSALLGGWLLRSQLRPLDRM 180

Query: 181 VHQSHAIARREFLSLPELPRTPELRRVVQAMNQMVEKLKALFQEQAERSEKLRVESYQDN 240
           V Q+HAI +REF++LP LPRTPELRRVVQAMNQMV+KLK LF E+AERSEKLR ++YQD+
Sbjct: 181 VEQAHAITQREFITLPHLPRTPELRRVVQAMNQMVDKLKTLFAEEAERSEKLRQQAYQDD 240

Query: 241 LTGLANRRYFEMQLNARVSNPEQASSGYLLLLRVKDLAGLNQRLGGQRTDQLLQAVGEQL 300
           LTGLA+RR  +++L+ +++  E  + GYLLLL++ DL GLNQR GGQ +D+L+ A+GEQL
Sbjct: 241 LTGLASRRLLDLRLSTQLAPDEHHAEGYLLLLQIHDLNGLNQRYGGQFSDRLIVAIGEQL 300

Query: 301 LRECARYPETHNLVTRIRGGEFAVLAPGLVREEALQLAQNLEAALASLHATGATDVASVA 360
           +R  +R      L  R RG EF +LAPGL ++E   L   L   L +L  TG+TD   VA
Sbjct: 301 MRLKSRRGRADWLAARNRGSEFVLLAPGLHQDEVTPLLNALSDELETLRPTGSTDSIPVA 360

Query: 361 SIGLAPFVHGDSPQAVLQLGDQALAQAESQGEPGWACLDHSAVASVGDDHHAWHTLLDQA 420
            IG+  F  G++PQ VL+  DQALAQA++ G   W  L+    A    D H+WH  L QA
Sbjct: 361 HIGVTAFRLGETPQDVLERADQALAQAQA-GNTAWQLLE-GYWAQPLRDQHSWHETLQQA 418

Query: 421 LNHQRFELYFQPVVAARDTQVVLHYKVLSRLLDEQGQTIPAGRFLPWLERFGWTARLDRL 480
           L      LY QPV  A +   +LH+KVL+RL    G+ + AGRFLPWLER GW AR D +
Sbjct: 419 LADSALALYVQPVGLAAEPAQILHHKVLARLPIASGEPLTAGRFLPWLERLGWAARFDYI 478

Query: 481 MLEQVLRQMAGHEQSLALNLSSATLADPQALNKIFEILRAHSNLGSRLTLEIGEEQLPEQ 540
           MLE V+ ++    Q LAL+LS+ATL D + L ++F +L ++    S L LE+    LP  
Sbjct: 479 MLELVIARLKLAPQPLALSLSAATLRDARHLQQVFALLHSNPAEASHLILELDALHLPVD 538

Query: 541 AVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLSRLGLAYLKIDGSYIRAIDQESDKRLFI 600
             L+  ++++R  G  L LQ FGG FS IG+L+ LGLA++K+DG+YIR ID++ DKRLFI
Sbjct: 539 VHLQHWSQKVRTTGTRLGLQHFGGDFSKIGHLAHLGLAHVKVDGAYIRGIDKDEDKRLFI 598

Query: 601 EAIQRAAHSIDLPLIAERVETEGELAVIREMGLFGVQGQLVGEPRRW 647
           EAI R  +SIDLPLIAE VET+GEL V+ E+G+ G  G L+G PR W
Sbjct: 599 EAIYRTTNSIDLPLIAEMVETQGELKVLTELGVRGAMGHLLGAPRPW 645