Pairwise Alignments

Query, 662 a.a., Membrane bound c-di-GMP receptor LapD from Pseudomonas fluorescens FW300-N2E2

Subject, 837 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Acidovorax sp. GW101-3H11

 Score =  140 bits (354), Expect = 2e-37
 Identities = 132/442 (29%), Positives = 199/442 (45%), Gaps = 37/442 (8%)

Query: 229 SEKLRVES------YQDNLTGLANRRYFEMQL-NARVSNPEQASSGYLLLLRVKDLAGLN 281
           +E+ +VES      + D+LTGL NRR    +L +A ++     S G LL + + +   LN
Sbjct: 393 TERKQVESQIERLAFYDSLTGLPNRRLLVDRLQHATLAVARSDSQGALLFIDLDNFKDLN 452

Query: 282 QRLGGQRTDQLLQAVGEQLLRECARYPETHNLVTRIRGGEFAVLAPGLVRE------EAL 335
             LG    DQLL  V ++L + C R  +T   V R  G EF VL  GL  +      EA 
Sbjct: 453 DTLGHDTGDQLLLQVAQRL-KACVRESDT---VARFGGDEFVVLVEGLSPDADHASAEAA 508

Query: 336 QLAQNLEAALASLHATGATDVASVASIGLAPFVHGDSPQAVLQL---GDQALAQAESQGE 392
            +A ++   L   +  G     S  SIG+A F  G  P +V +L    D A+ QA++ G 
Sbjct: 509 LVASHIATTLGKPYVLGDASHHSSPSIGIALF--GQQPLSVDELLKHADLAMYQAKAAGR 566

Query: 393 PGWACLDHSAVASVGDDHHAWHTLLDQALNHQRFELYFQPVVAARDTQVVLHYKVLSRLL 452
                 D    A+V +   A    L + L  +   LY+QPVV  +    +   + L R  
Sbjct: 567 NTQRFFDPDMQAAVSN-RSALEADLRRGLQEKELVLYYQPVVDGKGR--LQGAEALVRWR 623

Query: 453 DEQGQTIPAGRFLPWLERFGWTARLDRLMLEQVLRQMAGHEQS-------LALNLSSATL 505
             +   +    F+P  E+ G    L   +++    Q+    +S       L++N+S    
Sbjct: 624 HPRRGMVSPAEFIPLAEQTGLILPLGHWVMQAACAQLVAWSRSSLTRQFFLSVNVSVRQF 683

Query: 506 ADPQALNKIFEILRAHSNLGSRLTLEIGEEQLPEQAVLEQLTRR---LRELGFSLSLQRF 562
             P  + ++   L A      RL LE+ E  L   A +E +  R   LR  G   SL  F
Sbjct: 684 RQPDFVEQVLGALDATGANPERLKLELTESLL--LADVEDIIARMEHLRRYGVGFSLDDF 741

Query: 563 GGRFSMIGNLSRLGLAYLKIDGSYIRAIDQESDKRLFIEAIQRAAHSIDLPLIAERVETE 622
           G  +S +  L RL L  LKID S++R +  + +    +  I   A S+DL ++AE VET 
Sbjct: 742 GTGYSSLSYLKRLPLDQLKIDQSFVRDLQTDPNDAAIVRTILALADSLDLGVVAEGVETT 801

Query: 623 GELAVIREMGLFGVQGQLVGEP 644
           G+L  ++  G    QG L G P
Sbjct: 802 GQLEFLQRYGCKAFQGYLFGRP 823