Pairwise Alignments

Query, 449 a.a., Type I secretion system, outer membrane component LapE from Pseudomonas fluorescens FW300-N2E2

Subject, 470 a.a., TolC family type I secretion outer membrane protein (RefSeq) from Shewanella loihica PV-4

 Score =  293 bits (751), Expect = 6e-84
 Identities = 173/451 (38%), Positives = 262/451 (58%), Gaps = 23/451 (5%)

Query: 3   LHLFKALPFALAASFV------QAQTLPQAMQQALDVHPEIQAGVNSRLAADYQLKAAKG 56
           +H  K    ALA S +       +QTL QA+   LD +P+I+   N   A + Q+  A  
Sbjct: 6   MHQLKRSAMALAISAMLIPGAASSQTLEQAVAHTLDTNPDIRIAFNRFKAREEQVNQAIA 65

Query: 57  GYLPRVDLAAGYGREGTDSVTTRS-GGTNHWET-----LNRSESSLRLSQMVFDGFATSS 110
           GY+P VD++ GYG E T+S +TR   G    +      L R E    + QM+FDGF TSS
Sbjct: 66  GYMPTVDISGGYGWEQTNSPSTRRRAGQGDVDKDGVIELMRGEVGFSIKQMLFDGFYTSS 125

Query: 111 EVGRQQATVNARAYSLLDASERTGLTVAQVYLDVLTRREFVRLAEENLKSHERIFDQIKL 170
           EV R     +A  ++L  A+E   L VA+VY++ +   + + LAE+NL+SH+ I+DQIK 
Sbjct: 126 EVDRFSFEASADQWALFAAAEDIALDVAKVYVNYIRSEQVLTLAEKNLQSHKDIYDQIKQ 185

Query: 171 RTSRGVGSGADLDQAEARMAQARNNLITEQTNLADAETNYLSAVGQLPDQLERPADFLAL 230
           RT  G+GS ADL Q   R+A+A  N+I  + N  DA+  ++  V + P+ L  P     +
Sbjct: 186 RTDSGLGSVADLSQITGRLARANANVIAAKNNFFDAKAQFIRIVEKEPENLIVPVPDDDM 245

Query: 231 LPANLTEARAQMLENSPVLRSAEADIAAAEQQYEAAKSSFYPRFDAELGRTADNDLDGQN 290
           LP NLT+      EN P+L+SA +DI+AAE +  +A+S++YP+   ELG   +++LDG++
Sbjct: 246 LPTNLTDGLKVAQENHPILKSAASDISAAENERSSAQSNYYPKLSLELGGNWNDNLDGED 305

Query: 291 -----------GHNNEWQAMLRMRFNLYAGGSNKADLESKSYLSNQALDIRNNALRQLNE 339
                      GHNN+  AM+R+++NL+AGG + A  +  +Y   +A +IR  A RQ+ E
Sbjct: 306 GYSAFASQNVGGHNNDLIAMVRVKYNLFAGGKDLAREKEAAYKIGEAKEIRQRAYRQVVE 365

Query: 340 ELGLAWNALNNANAQVPVAQQYVDRSANVRTAYQKQFSLGERTLLDLLDSENELFSASRR 399
            + LAWNA      Q    + +V  + + + AY +QF+LG+RTLLDLLD+ENELF A + 
Sbjct: 366 GVNLAWNAYEMLEPQKLYIRDHVIAAKDTQVAYSQQFNLGQRTLLDLLDTENELFEARKD 425

Query: 400 LAEIKNVQLFTQYRIKATMGQLLKSQGVVAP 430
             + +  ++ ++YRI    G+LL+S  V  P
Sbjct: 426 YLDAEYDEIISEYRILNATGRLLESLRVTRP 456