Pairwise Alignments

Query, 449 a.a., Type I secretion system, outer membrane component LapE from Pseudomonas fluorescens FW300-N2E2

Subject, 471 a.a., agglutination protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  291 bits (746), Expect = 2e-83
 Identities = 170/445 (38%), Positives = 261/445 (58%), Gaps = 20/445 (4%)

Query: 5   LFKALPFALAASFVQAQTLPQAMQQALDVHPEIQAGVNSRLAADYQLKAAKGGYLPRVDL 64
           L  A+   L+A   Q+QTL QA+   LD +P+++   N   A + Q+  A  GY+P VDL
Sbjct: 17  LLSAILLPLSA---QSQTLEQAVAHTLDTNPDLRVAFNRFKAREEQVNQAIAGYMPTVDL 73

Query: 65  AAGYGREGTDSVTTRSG------GTNHWETLNRSESSLRLSQMVFDGFATSSEVGRQQAT 118
             GYG E TDSV+TR         +N    LNR E  + L QM+FDGF TSSEV R    
Sbjct: 74  TGGYGYEQTDSVSTRRRKNVGDVDSNGVAELNRGEFGISLKQMLFDGFYTSSEVDRYSFE 133

Query: 119 VNARAYSLLDASERTGLTVAQVYLDVLTRREFVRLAEENLKSHERIFDQIKLRTSRGVGS 178
            +A  ++LL A+E   L V++ YL+ L   E ++LAE+NL SH+ I+DQIK RT  G+GS
Sbjct: 134 ASADQWALLAAAEDMALDVSKAYLNYLRTDEVLKLAEKNLNSHKEIYDQIKQRTDSGLGS 193

Query: 179 GADLDQAEARMAQARNNLITEQTNLADAETNYLSAVGQLPDQLERPADFLALLPANLTEA 238
            ADL Q   R+A+A  N+I+ + NL DA+  ++  V   P  L +P     +LP +L  +
Sbjct: 194 TADLSQISGRLARANANVISARNNLLDAKAQFVRVVAADPVDLIQPVPDADMLPKDLNSS 253

Query: 239 RAQMLENSPVLRSAEADIAAAEQQYEAAKSSFYPRFDAELGRTADNDLDGQN-------- 290
            A   +N P+L+SA  DI AAE +  + ++++YP+   EL  + +ND+ G++        
Sbjct: 254 IADAEKNHPILKSAANDIRAAENERSSTQANYYPQVSLELNGSWNNDVGGEDGVSAIASQ 313

Query: 291 ---GHNNEWQAMLRMRFNLYAGGSNKADLESKSYLSNQALDIRNNALRQLNEELGLAWNA 347
              G++N+  AM+R+++NL+AGG + A  +  +Y  ++A +IR  A R++ E + LAWNA
Sbjct: 314 NVGGYSNDIVAMVRVKYNLFAGGKDLAREKESAYKLSEAKEIRQRAQREVVEGVNLAWNA 373

Query: 348 LNNANAQVPVAQQYVDRSANVRTAYQKQFSLGERTLLDLLDSENELFSASRRLAEIKNVQ 407
                 Q    + +V  + + ++AY +QF+LG+R+LLDLLD+ENELF A +   + +  +
Sbjct: 374 YEMLAPQKQYIRDHVIAAKDTQSAYAQQFNLGQRSLLDLLDTENELFEARKDYLQAEYDE 433

Query: 408 LFTQYRIKATMGQLLKSQGVVAPLA 432
              +YR+  + G+LL S  V  P A
Sbjct: 434 TIAKYRVLNSTGRLLDSLKVTRPEA 458