Pairwise Alignments

Query, 449 a.a., Type I secretion system, outer membrane component LapE from Pseudomonas fluorescens FW300-N2E2

Subject, 456 a.a., type I secretion outer membrane protein, TolC family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  211 bits (538), Expect = 3e-59
 Identities = 135/413 (32%), Positives = 221/413 (53%), Gaps = 4/413 (0%)

Query: 16  SFVQAQTLPQAMQQALDVHPEIQAGVNSRLAADYQLKAAKGGYLPRVDLAAGYGREGTDS 75
           SF + + L  ++   ++ +P+++    +R AA + L+ A+ G+LPRVD+ AGYG E    
Sbjct: 32  SFAETK-LKDSVLSTINSNPKLKVFQENREAATHDLRRARAGWLPRVDVRAGYGAEQYSD 90

Query: 76  VTTRSGGTNHWETLNRSESSLRLSQMVFDGFATSSEVGRQQATVNARAYSLLDASERTGL 135
            T+R    +  E   R ++S  L+Q V+DGFATSS V   +A +++    L+D +E  GL
Sbjct: 91  TTSRQSNKDD-EFTERGDASAVLTQTVWDGFATSSRVDVGKAKLDSADNRLMDNAEALGL 149

Query: 136 TVAQVYLDVLTRREFVRLAEENLKSHERIFDQIKLRTSRGVGSGADLDQAEARMAQARNN 195
                +++VL +RE VRL+E N++ H+ I      R   GV S AD+ Q + R+A+A++ 
Sbjct: 150 DAVLAHIEVLRQREIVRLSEINVQQHQTILGSQSERQKMGVASIADVTQTQGRLARAQST 209

Query: 196 LITEQTNLADAETNYLSAVG-QLPDQLERPADFLALLPANLTEARAQMLENSPVLRSAEA 254
           L+  ++ L  AE  Y    G ++P +LER A      PA+   A    L  +P + + ++
Sbjct: 210 LVESRSALEVAEAAYKRLTGMEVPTELER-AGIPDTAPASFETALGASLTANPKIAAYQS 268

Query: 255 DIAAAEQQYEAAKSSFYPRFDAELGRTADNDLDGQNGHNNEWQAMLRMRFNLYAGGSNKA 314
           DI AA  Q +  KS F+P    E+G +    ++    +     AM+R+ +N+Y GG++ A
Sbjct: 269 DIQAARGQEDLDKSRFHPNVYLEVGPSYKERVESSESYAWGTTAMMRVNWNIYDGGADVA 328

Query: 315 DLESKSYLSNQALDIRNNALRQLNEELGLAWNALNNANAQVPVAQQYVDRSANVRTAYQK 374
            +   +    Q+     N L  LNEE    W+   +A+ Q       V  +   R  Y +
Sbjct: 329 AVRGSAARVRQSRQELQNLLDTLNEETRATWSRYLSAHEQSSFYTTAVTYNTQTRDTYMQ 388

Query: 375 QFSLGERTLLDLLDSENELFSASRRLAEIKNVQLFTQYRIKATMGQLLKSQGV 427
           QF +G+R+LLD+LD+ENEL+S+  +L   K  +  T YR+ A  G LL S  +
Sbjct: 389 QFLVGQRSLLDVLDAENELYSSEVQLVTAKANEAGTAYRLLALGGNLLASLSI 441