Pairwise Alignments

Query, 721 a.a., Type I secretion system ATPase, LssB family LapB from Pseudomonas fluorescens FW300-N2E2

Subject, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  576 bits (1484), Expect = e-168
 Identities = 299/698 (42%), Positives = 459/698 (65%), Gaps = 2/698 (0%)

Query: 23  DPLLDGLLALCMLHQKPASAAMLTTGLPLPKQRLSVELLSRAAARAGLQGRVLQRKLEQI 82
           D LL+ L+ +   +    S   L  GLPL   +L+  L  R+A RAGL  +  +  L+QI
Sbjct: 3   DTLLNSLVYVSRYYGLANSPEALINGLPLADGKLTPFLFPRSAERAGLIAKENRAPLDQI 62

Query: 83  PTIAMPALLLLKDGRSAVLLGWVGDDQ-ARLLLSESDGGEVTISRELLADDYSGKVFFAQ 141
           P +  P +LLLK G + VL     + Q A ++ +ES    V  S   L   Y G+ F  +
Sbjct: 63  PHLVFPVVLLLKGGEACVLNSINQETQEAEIVTAESGLVPVAYSLSDLEAMYIGRYFMVK 122

Query: 142 PQHKFDVNHGTLI-PRARSWFRDTLKRSRWLYADAIAASLLINIIAMAAPLFVMNVYDRV 200
            Q +FD     ++ PR   WF  T+ +S+ +Y D + ASLLIN+ A+AAP+F   VYD+V
Sbjct: 123 KQFRFDERSPEVLKPRDGHWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYDKV 182

Query: 201 VPNQAESTLWVLAVGIIGAYVFDLILKMLRSLCLDLAGKKTDLIISATLFERIVGMSMKY 260
           VPN A  TLWVL+ GI+  ++FD + KMLRS  +D+AGKK+D++IS+ LF +++G+ M+ 
Sbjct: 183 VPNLAFETLWVLSSGILVIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRMEA 242

Query: 261 RPARVGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTLLIFMVIAIIGGHLVWIPVLAFPI 320
           RP  VG+FA+++ EF+S+R+F  S T++SLIDLPF LL  ++I ++ GHLVW+PV+   I
Sbjct: 243 RPPSVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVLI 302

Query: 321 ALLIGYALQKPLVATMERTMALGAERQSSLIETLAGLDAVKVNNAESERQYQWEQTIGTL 380
            ++  + +Q  L   +E    L +++ ++LIE+LAGL+ VK+  A+ + QY+WE+ +  +
Sbjct: 303 LVIYSFLIQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAHM 362

Query: 381 SRLELRVKMLSGLAMNITLLIQQLAGVIMIVFGVYLIIAGNLSMGGLVACYMLSGRALSP 440
           +   ++ + ++    N    +QQ A + MI+ GVYLI  G+L+MGGL+A  MLSGRA+ P
Sbjct: 363 ANWNIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGP 422

Query: 441 LASLSGLLTRYQQARVTMTSVDQMMELPQERNFDERPLSRKVLQGAVECRQLNFTYPNQQ 500
           L  LS L TRY QA+ +MT ++Q+M +P E+   +R + R ++QG +E  ++ F YPN  
Sbjct: 423 LVQLSLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPNSP 482

Query: 501 NPALKNINLVIKPGEKIGIIGRSGSGKSSLAKLLVGLYQPDDGALLVDGVDIRQIDVSEL 560
             ++++++L I PGEK+ IIGR GSGK++L +L++GLY+P +G + +D  DI Q+   ++
Sbjct: 483 IASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDI 542

Query: 561 RYNIGYVPQDIQLLAGTLRDNLTSGARYVEDELVLQAAELAGVHEFARLHPQGYELQVGE 620
           R NIG VPQD  L  G++RDN+T G    +D  V+ AA  AGV  F +  P G E QVGE
Sbjct: 543 RRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGE 602

Query: 621 RGQNLSGGQRQNVALARALLLNPPILLLDEPTSAMDNTGEERLKQRLAAVVENKTVLLVT 680
            G  LSGGQRQ+V++ARA L  PP+LL+DEPTSAMDN  E  +KQ+L+ +  ++T++L+T
Sbjct: 603 GGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILIT 662

Query: 681 HRASLLSLVDRLLVIDRGQILADGPKAAVMEALKKGQI 718
           H+ S+L +VDR++V+++G I+ADGPK  V+  L++G +
Sbjct: 663 HKTSMLDVVDRVIVMEKGCIIADGPKHEVLNDLRQGNV 700