Pairwise Alignments

Query, 721 a.a., Type I secretion system ATPase, LssB family LapB from Pseudomonas fluorescens FW300-N2E2

Subject, 726 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  556 bits (1434), Expect = e-162
 Identities = 298/701 (42%), Positives = 452/701 (64%), Gaps = 7/701 (0%)

Query: 23  DPLLDGLLALCMLHQKPASAAMLTTGLPLPKQRLSVELLSRAAARAGLQGRVLQRKLEQI 82
           DPLLD L+ L      P S+  L  GLPL    L+ EL+ +AA RAGL  ++ ++ L+QI
Sbjct: 23  DPLLDSLVLLTEYFGSPCSSESLAAGLPLSGSILTPELVPQAAGRAGLAAKLTRKGLDQI 82

Query: 83  PTIAMPALLLLKDGRSAVLLGWVGDDQARLLLSESD-GGEVTISRELLADDYSGKVFFAQ 141
             I +P +LLLKD ++A LL  +  D+ R ++   + GGE  +S E L   Y G +F  +
Sbjct: 83  SPILLPCILLLKD-KNACLLREIDIDKDRAVIQLPETGGEEELSIEALEAMYVGYLFLVK 141

Query: 142 PQHKFDVNHGTLIPRARS-WFRDTLKRSRWLYADAIAASLLINIIAMAAPLFVMNVYDRV 200
            Q++ D+     +  +R+ W   TLK S  +Y DA+ AS+L+N+ A+ +PLF+MNVYD+V
Sbjct: 142 QQYRGDMGLDLHLHDSRTHWLIQTLKDSAPIYRDALIASVLVNLFALVSPLFIMNVYDKV 201

Query: 201 VPNQAESTLWVLAVGIIGAYVFDLILKMLRSLCLDLAGKKTDLIISATLFERIVGMSMKY 260
           VPN A  +LWVLA+G   AY+FDLI++ LR+  +D+AGKK D+I+S+ LF + +G+ ++ 
Sbjct: 202 VPNLAFESLWVLAIGAGIAYIFDLIMRQLRAYLIDVAGKKVDIIVSSRLFAKAIGIPLEK 261

Query: 261 RPARVGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTLLIFMVIAIIGGHLVWIPVLAFPI 320
           R   +G  A+ + EF S+R+ L S T+T+L+DLPF L   ++I I+ G L  IPV+    
Sbjct: 262 RSPSIGGMARQLGEFDSIREILTSATITTLVDLPFALFFMLIIYIVAGDLAIIPVIGG-- 319

Query: 321 ALLIGYAL--QKPLVATMERTMALGAERQSSLIETLAGLDAVKVNNAESERQYQWEQTIG 378
            ++IGY L  Q  L A +E +    + +   LIE+LA ++++K + AE   Q  W+Q IG
Sbjct: 320 CIIIGYTLLMQPRLKAAIEESNKFSSLKHGHLIESLASIESIKSSGAEGLVQKSWQQMIG 379

Query: 379 TLSRLELRVKMLSGLAMNITLLIQQLAGVIMIVFGVYLIIAGNLSMGGLVACYMLSGRAL 438
             +  +L+VK +S    N+     QL+ V +++ GVY +   ++SMGG++A  +LS RA+
Sbjct: 380 HTANWQLKVKKISTSVTNVANFTVQLSVVCVVILGVYRVADNDISMGGIIAAVILSSRAI 439

Query: 439 SPLASLSGLLTRYQQARVTMTSVDQMMELPQERNFDERPLSRKVLQGAVECRQLNFTYPN 498
           SP+A L+GL+TR       +  +DQ+M    E       +S+  L+G +    ++F YP 
Sbjct: 440 SPMAQLAGLMTRGNHTASALRQLDQIMTQEDEFENKGHLVSKHRLKGQINADHVSFNYPG 499

Query: 499 QQNPALKNINLVIKPGEKIGIIGRSGSGKSSLAKLLVGLYQPDDGALLVDGVDIRQIDVS 558
            + P L  ++L I PGE+I IIGR+GSGKS+LAKLLVGLYQP  G+L  DG+D  QI  +
Sbjct: 500 SERPVLHPMSLSIAPGERIAIIGRNGSGKSTLAKLLVGLYQPTKGSLRYDGLDSAQIHPT 559

Query: 559 ELRYNIGYVPQDIQLLAGTLRDNLTSGARYVEDELVLQAAELAGVHEFARLHPQGYELQV 618
           +LR N GY+PQDI L  GT+RDN+  G R V +  +++A +L+GV++F  +  +G + QV
Sbjct: 560 DLRRNFGYLPQDITLFHGTIRDNILFGTRQVTEHQLIRAVQLSGVNQFTDIETEGLDQQV 619

Query: 619 GERGQNLSGGQRQNVALARALLLNPPILLLDEPTSAMDNTGEERLKQRLAAVVENKTVLL 678
           GE GQ+LS GQRQ +ALARA L +PP+LL+DEPT+++D   E++  + +  V + +T+LL
Sbjct: 620 GEGGQSLSRGQRQTIALARATLNDPPVLLMDEPTASLDARAEKQFIRAMRNVSKERTLLL 679

Query: 679 VTHRASLLSLVDRLLVIDRGQILADGPKAAVMEALKKGQIS 719
           +TH+  LL+LVDR+LV+DRG ++ADGPK  V+  L KG +S
Sbjct: 680 ITHKMHLLNLVDRILVLDRGHLVADGPKEQVLNQLAKGLLS 720