Pairwise Alignments

Query, 721 a.a., Type I secretion system ATPase, LssB family LapB from Pseudomonas fluorescens FW300-N2E2

Subject, 776 a.a., ABC transporter, ATP-binding protein/permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  582 bits (1499), Expect = e-170
 Identities = 305/703 (43%), Positives = 460/703 (65%), Gaps = 7/703 (0%)

Query: 24  PLLDGLLALCMLHQKPASAAMLTTGLPLPKQR---LSVELLSRAAARAGLQGRVLQRK-L 79
           PL+  L  L  L+ KP S   L +GLP+       L+   L RAA  AG++ RV  +  L
Sbjct: 58  PLMQCLALLFRLNGKPVSTRYLMSGLPMGATEGPALTAACL-RAARVAGMEARVAYKPTL 116

Query: 80  EQIPTIAMPALLLLKDGRSAVLLGWVGDDQARLLLSESDGGEVTISRELLADDYSGKVFF 139
            QI  + +P ++LLKD ++ +L+   G+ QA +L  E+    VT+    LA++Y+G   F
Sbjct: 117 RQISPLTLPCIMLLKDEKACILMRIQGE-QAEVLFPETGMDAVTVPLSRLAEEYAGYAVF 175

Query: 140 AQPQHKFDVNHGTL-IPRARSWFRDTLKRSRWLYADAIAASLLINIIAMAAPLFVMNVYD 198
             P  K D     + + + + WF DTL     +Y   + AS+++N++ +A+PLF MNVYD
Sbjct: 176 GSPVSKLDKRASEMRLLKVKRWFWDTLLHFLPIYRHVLLASVVVNLLTVASPLFFMNVYD 235

Query: 199 RVVPNQAESTLWVLAVGIIGAYVFDLILKMLRSLCLDLAGKKTDLIISATLFERIVGMSM 258
           RVVPN A  TLWVLAVGI  AY+ D +L+ LRS  +D+AG+  D+++++ L + ++ + +
Sbjct: 236 RVVPNSATDTLWVLAVGIGIAYICDFVLRNLRSYFVDVAGRNADVVLASRLMQHLMAVRL 295

Query: 259 KYRPARVGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTLLIFMVIAIIGGHLVWIPVLAF 318
             +P   GS A N+ EF+SLR+F  S TL +L+DLPF +L   ++A+IGG ++ +P +A 
Sbjct: 296 DNKPDSTGSLANNLREFESLREFFGSTTLLALVDLPFLVLFLFIVALIGGEMIALPAIAI 355

Query: 319 PIALLIGYALQKPLVATMERTMALGAERQSSLIETLAGLDAVKVNNAESERQYQWEQTIG 378
           P+ L +G  +Q P     E       ++ + L+E + GL+ VK + AE   Q+ WE+ +G
Sbjct: 356 PVVLGVGMLVQYPFQRVAEAGYKEAMQKNALLVEIINGLETVKASMAEGRLQHAWEKVVG 415

Query: 379 TLSRLELRVKMLSGLAMNITLLIQQLAGVIMIVFGVYLIIAGNLSMGGLVACYMLSGRAL 438
             +R     K L+ L++ ++LL+ QL  V +I++GVY I  G L+MGGL+AC MLS RA+
Sbjct: 416 MSARSNAHSKGLANLSITVSLLVTQLVSVGIIIWGVYKISDGTLTMGGLIACNMLSARAM 475

Query: 439 SPLASLSGLLTRYQQARVTMTSVDQMMELPQERNFDERPLSRKVLQGAVECRQLNFTYPN 498
           +PL+ ++ +L R QQ+R+ + S+D +M+LP ER  D   +    L+ ++E   ++F YP 
Sbjct: 476 APLSQIAAMLARLQQSRMALKSLDILMQLPVERPEDRPYVDFGPLEHSLELESVSFAYPG 535

Query: 499 QQNPALKNINLVIKPGEKIGIIGRSGSGKSSLAKLLVGLYQPDDGALLVDGVDIRQIDVS 558
            +  AL  ++L I+PGEK+G+IG+ GSGKS+L +L++GLYQP DGA+   GVDIRQ+D++
Sbjct: 536 AERLALDGVSLRIRPGEKVGVIGKMGSGKSTLGRLMMGLYQPRDGAVKFGGVDIRQMDMA 595

Query: 559 ELRYNIGYVPQDIQLLAGTLRDNLTSGARYVEDELVLQAAELAGVHEFARLHPQGYELQV 618
           +LR  IGY+ QD  L  GTLRDN+  G    +D ++++AA++AGV EFAR HP G+ LQV
Sbjct: 596 DLRGRIGYLSQDNYLFYGTLRDNIAMGVPNADDRMIMRAADVAGVTEFARNHPAGFGLQV 655

Query: 619 GERGQNLSGGQRQNVALARALLLNPPILLLDEPTSAMDNTGEERLKQRLAAVVENKTVLL 678
           GERG  LSGGQRQ VALARALL +P +L+LDEPTS MD   E   KQRL A++ +KT++L
Sbjct: 656 GERGMALSGGQRQAVALARALLHDPDVLILDEPTSNMDTGSEFAFKQRLRALLGDKTLVL 715

Query: 679 VTHRASLLSLVDRLLVIDRGQILADGPKAAVMEALKKGQISVA 721
           +THR S++ LVDRL+V+D G+I+ADGP+ AV++AL+   +  A
Sbjct: 716 ITHRMSVIDLVDRLVVVDGGRIVADGPRDAVIKALRSTGVQAA 758