Pairwise Alignments

Query, 445 a.a., Type I secretion system, membrane fusion protein LapC from Pseudomonas fluorescens FW300-N2E2

Subject, 448 a.a., type I secretion membrane fusion protein, HlyD family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  351 bits (900), Expect = e-101
 Identities = 190/432 (43%), Positives = 276/432 (63%), Gaps = 1/432 (0%)

Query: 14  QPLPEVNKALIEDAPRVVRLTIWGIIGFFVFLALWANFAVIDEVTKGDGKAIPSSKIQKV 73
           Q + EV+ AL         L    I G F    +WA FA +DEVT+G G+ IPS ++Q +
Sbjct: 18  QFMSEVDAALHRAGHPYAYLLSCAIFGVFAIFFVWAAFAPLDEVTRGQGQVIPSQRVQVI 77

Query: 74  QNLEGGIVAELFVKEGQIVEAGAPLIRLDDTRFVSNVGETEADRLSMLLRVERLSAEVDD 133
           QNLEGGI+ EL V E QIVE G  L+R+D+    S   +     +   + + RL AE++ 
Sbjct: 78  QNLEGGILRELLVHESQIVEKGDVLLRIDNEAAESFYRDALGKSVEHQIAIARLEAELEG 137

Query: 134 RPLNFPADVLKAVPGQAASEESLYISRRQQLHDEIGGLQEQLIQRQQELREFVSKQAQYR 193
           R   +PA+++   P    ++  +Y +RRQQ+  E   L+ QL Q++QE+ E  S++ Q  
Sbjct: 138 RDPVYPAELMTEWPQVVENQADVYRARRQQVAVEQRVLEAQLHQKEQEIEEMTSRKRQLE 197

Query: 194 SGLALQRQEINMSEPLVAQGAVSPVEVLRLKRAEVETRGQLDATTLAIPRAESAIKEVQR 253
             L +  ++  ++ PL+ +     VE L L++  +  RG++ +  ++IP+A +A  E + 
Sbjct: 198 DSLRVAVEQREIARPLMEKQIYPRVEYLSLEQKVISLRGEISSLAISIPKARAAADEAKE 257

Query: 254 KIDETRGKFRSDALTQLNEARTDLNKAQATGKALEDRVSRTLVTSPVRGIVNKLLVNTIG 313
           ++   + + RS+AL +LN+ R +LN  + T  A  DRV+RT V SPVRG V +L++NT+G
Sbjct: 258 RLAFRKAQIRSEALEELNKRRGELNSLRETLSAGGDRVTRTDVRSPVRGTVKRLIINTVG 317

Query: 314 GVIQPGSDLVEIVPLDDTILVEAKIRPQDIAFLHPGQDATVKFTAYDYTIYGGMKAKLEQ 373
           GVI+PG  ++EIVPLDDT+L+EA+IRP DIAFLHP Q A VK TAYDY+IYGG++  +EQ
Sbjct: 318 GVIKPGEPIMEIVPLDDTLLIEARIRPADIAFLHPDQKAVVKITAYDYSIYGGLEGVVEQ 377

Query: 374 IGADTITDEDKKTTYYIIKLRTERSHLGTDEKPLLIIPGMVASVDIITGKKTVLSYLLKP 433
           I ADTI D  K   YY++KLRT +S +    + L I+PGM A+VDI+TGKKTVL YLLKP
Sbjct: 378 ISADTIEDR-KGEFYYLVKLRTRKSAIVYRGEALPIMPGMTATVDILTGKKTVLDYLLKP 436

Query: 434 IIKARAEALHER 445
           I+KA+  AL ER
Sbjct: 437 ILKAQQNALRER 448