Pairwise Alignments

Query, 146 a.a., FIG00954962: hypothetical protein from Pseudomonas fluorescens FW300-N2E2

Subject, 352 a.a., Peptidoglycan-binding LysM (NCBI) from Rhodospirillum rubrum S1H

 Score = 49.7 bits (117), Expect = 5e-11
 Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 14/134 (10%)

Query: 21  GNANASEQLKAHIEKVGLGNPNVQATLDGDKVIVTGEVASQEEKEKILLAVGNIEGVGSV 80
           G A   + ++A+++   +G   V A  DG   + T    S     +  L    I   G V
Sbjct: 214 GTAAPGDSVRAYLDNTAIGEGVVGA--DGRWAVTT---PSPLAPGRYTLRADAIGPGGKV 268

Query: 81  DDQITVT--------GPVAQAARFVTVKKGDTLSAISKAEYGDANKYNKIFEANKPMLSH 132
             ++ +          P      FV V+ G+ L A+++  YG+  +Y  I+EAN+  +  
Sbjct: 269 GGRVEIPFLRPDVLPSPGDGGMMFV-VQPGNNLWALARRVYGEGTRYTVIYEANQAQIRD 327

Query: 133 PDKIYPGQVLRIPE 146
           PD IYPGQ+  +P+
Sbjct: 328 PDLIYPGQIFAVPD 341