Pairwise Alignments

Query, 463 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas fluorescens FW300-N2E2

Subject, 459 a.a., C4-dicarboxylate transport transcriptional regulatory protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  437 bits (1124), Expect = e-127
 Identities = 238/453 (52%), Positives = 307/453 (67%), Gaps = 8/453 (1%)

Query: 1   MTIDNRIE---VVLIDDDPHLRQALSQTLDLAGLKILPLAEAKGVAGQLPRDWPGVVVSD 57
           M++ N I+   V++IDD+PH+   L Q  +L G+K     + KG+A  L RDW GVV+SD
Sbjct: 1   MSVPNSIQDYSVLIIDDEPHIGTVLVQLFELEGIKAFAATDPKGIAKLLDRDWAGVVISD 60

Query: 58  IRMPGMDGLELLNELHAQDAELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDHLLDS 117
           + MP +DG+ L+ ++  QDA+LPV+L+TG GD+ +AV A++ GAYDFLEKPF ++H+LD 
Sbjct: 61  VNMPQLDGISLMQQIREQDADLPVVLLTGFGDIAMAVNALKQGAYDFLEKPFNNEHMLDV 120

Query: 118 VRRALALRRLVLDNRSLRLALSDRHELSARLVGQSTPMLRLREQIGALAATRADVLILGE 177
           V+RAL  R L L+NR L+  L   +    R++G S  + R+R  I  +  T ADVLI GE
Sbjct: 121 VKRALDKRSLTLENRKLKKELESHNVPGPRILGHSVGIQRMRHIIDQVIDTPADVLIEGE 180

Query: 178 TGAGKEVVARALHDLSSRRNGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFE 237
           TG GKE+VAR LHD S+R    FVAIN GA+ E+++ESELFG E GAFTG  K RIGKFE
Sbjct: 181 TGTGKELVARYLHDHSNRNQANFVAINCGAIPENLIESELFGAEAGAFTGVDKLRIGKFE 240

Query: 238 FANGGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNHQIPLDIRVIAATKEDLRQAAD 297
           +ANGGTLFLDEIES  L +QVKLLR+L++R VERLG N  I LDIRVIAATK DL+   D
Sbjct: 241 YANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSIHLDIRVIAATKVDLKSLCD 300

Query: 298 QGRFRADLYYRLNVAPLRIPPLRERGEDTLMLFQHFADEASARHGLPPHELQPAQRALLL 357
            G+FR DL YRLN+  + IPPLR+R ED  +LF HFA  ASAR+      L   Q A+L 
Sbjct: 301 TGQFRQDLLYRLNLVTVPIPPLRDRREDIPLLFLHFARMASARYHKALIALNAEQNAILT 360

Query: 358 RHSWPGNVRELQNAAERFA-LGLELALDNSAPDGNPGAPVELVSGGLSEQVENFEKTLIA 416
            H WPGNVREL+N AER+  LG E A   +   GN  AP    S  L ++VE FE+ LI 
Sbjct: 361 SHDWPGNVRELRNLAERYVLLGGEAAFAGTL--GN--APSLHTSMSLLQRVEFFERVLIE 416

Query: 417 AELARPHSSVRSLAEALGIPRKTLHDKLRKHGL 449
             L+    S++   E L +PRKTL+DK+RK+ L
Sbjct: 417 EALSHNKGSIKLTMEQLELPRKTLYDKMRKYDL 449