Pairwise Alignments

Query, 463 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas fluorescens FW300-N2E2

Subject, 472 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  339 bits (870), Expect = 1e-97
 Identities = 194/468 (41%), Positives = 271/468 (57%), Gaps = 24/468 (5%)

Query: 9   VVLIDDDPHLRQALSQTLDLAGLKILPLAEAKGVAGQLPRDWPGVVVSDIRMPGMDGLEL 68
           +++IDD+  +R +L   L+  G ++    + +     L  D P VV  DI MPGMDGL +
Sbjct: 5   ILIIDDEDDIRFSLRGILEDEGHEVTEAPDGEAGLRTLASDTPDVVFLDIWMPGMDGLTV 64

Query: 69  LNELHAQDAELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDHLLDSVRRALALRRLV 128
           L  +HA    LPV++I+GHG +  AV A++ GA+DF+EKP + + ++ +  RAL +R L 
Sbjct: 65  LEHIHAAAPSLPVIMISGHGTIETAVAAIKKGAHDFIEKPLSLEKVVIAAERALEMRELR 124

Query: 129 LDNRSLRLALSDRHELSARLVGQSTPMLRLREQIGALAATRADVLILGETGAGKEVVARA 188
            +N++LR +L    +    L+G+S PM R+REQI  +A T A VLI GE G GKE+ ARA
Sbjct: 125 RENQALRSSLGAGSKAD-ELIGESAPMRRIREQIARVAPTDAWVLITGENGTGKELAARA 183

Query: 189 LHDLSSRRNGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFANGGTLFLDE 248
           +H  S R   P VA+N  A+ E ++ESELFGHE GAFTGA+  R GKFE A+ GTLFLDE
Sbjct: 184 VHAGSQRATRPLVAVNCAAIPEELIESELFGHEKGAFTGAESARTGKFEMAHRGTLFLDE 243

Query: 249 IESMSLDVQVKLLRLLQERVVERLGGNHQIPLDIRVIAATKEDLRQAADQGRFRADLYYR 308
           I  MSL  Q K+LR+LQE+  E++GG   I +D+RV+AAT ++L +   QG FR DLYYR
Sbjct: 244 IGDMSLKTQAKILRILQEQSFEKVGGTRTIRVDVRVVAATNKNLEEQIAQGTFREDLYYR 303

Query: 309 LNVAPLRIPPLRERGEDTLMLFQHFADEASARHGLPPHELQPAQRALLLRHSWPGNVREL 368
           L V PL +P LRERG+D L L   F       H   P       + +LLR+ WPGNVREL
Sbjct: 304 LRVFPLSLPALRERGDDILRLLDAFMLRLCRDHAFAPLTFTDDAQDVLLRYRWPGNVREL 363

Query: 369 QNAAERFAL---GLELALDNSAP----------DGNPGAPVELVSGGLSEQVEN------ 409
           +N  ER  +   G  + +++  P          D   G   +  +      V+       
Sbjct: 364 RNFVERMLILHAGESVDVEDLPPECLRDLSPSSDSATGTAAQSATATCGTGVDGILDFKA 423

Query: 410 ----FEKTLIAAELARPHSSVRSLAEALGIPRKTLHDKLRKHGLHFGD 453
               FE   +A +L     +V  LAE +G+ R  LH KL+ +G+  GD
Sbjct: 424 ARNAFETRFLAEQLQECGGNVSRLAERIGLERSHLHRKLKGYGIIAGD 471