Pairwise Alignments

Query, 181 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) from Pseudomonas fluorescens FW300-N2E2

Subject, 188 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI) from Rhodospirillum rubrum S1H

 Score =  142 bits (358), Expect = 3e-39
 Identities = 79/175 (45%), Positives = 106/175 (60%), Gaps = 6/175 (3%)

Query: 8   LPDVLVIEPKVFGDDRGFFYESFNARAFAEATGCTLQFVQDNHSRSTR-GVLRGLHYQIE 66
           + +V ++ P  FGDDRGFF E++N  A AE  G TL+F+QDNHS S + G +RGLH+Q  
Sbjct: 10  IAEVKILRPAKFGDDRGFFSETYNKVALAEV-GITLEFIQDNHSFSAKAGTVRGLHFQTP 68

Query: 67  Q-TQGKLVRVTAGEVLDVAVDIRRSSPTFGQWASVRLSAQNHRQMWVPPGFAHGFVVLSE 125
              Q KL+RV  G + DVAVD+R  SPT+GQ  S  +SA    Q+ +P GFAHG   +  
Sbjct: 69  PFAQDKLIRVVRGALFDVAVDLRVGSPTYGQSVSAVISAAAWNQILIPAGFAHGLCTIEP 128

Query: 126 SADFLYKTTDYYAPSAERCIRWDDPQLAIDWEFE-GTPILSAKDLNGKALHEADL 179
             + LYK +  Y+P  ++ + W+DP L I+W    G  ILS KD     L  ADL
Sbjct: 129 DTEVLYKVSAPYSPDHDKGLLWNDPALGIEWPVSPGAAILSDKDARQPVL--ADL 181