Pairwise Alignments

Query, 188 a.a., Type IV pilus biogenesis protein PilN from Pseudomonas fluorescens FW300-N2E2

Subject, 194 a.a., fimbrial assembly family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  117 bits (294), Expect = 1e-31
 Identities = 61/176 (34%), Positives = 105/176 (59%), Gaps = 1/176 (0%)

Query: 1   MARINLLPWREELREERRKRFLLALVGALVGAVGVVLVAVRYFDSAIDHQVARNSHLSEQ 60
           MA INLLPWREE RE++++ ++  L    +G+  +V VA+   D   D Q  RN++L  +
Sbjct: 1   MANINLLPWREEAREKQKRDYIGILAAVFLGSAILVYVALSLLDMMTDEQRGRNAYLQSE 60

Query: 61  IAVLDERIKQISELKARRQQLVERMRIIQDLQGNRPVSGRIFDQLVRTLPDGVYFTEVKM 120
           I  LD +I +I ++  R++ +  R  II +LQ +R +   + D+LVR +P G+Y + ++ 
Sbjct: 61  IQQLDAQIAEIKKITERKKDIERRTEIILNLQQSRNLPTHVLDELVRIVPPGIYLSSLEK 120

Query: 121 EDRTLLIKGAAESNNRVSDLMRNLDSSDLFDTPSLTEVKATTAGQLDQANVFQLTV 176
           +   LLI+G +ESNN V+++MR + +S+    P++  +  +   +L Q   F L V
Sbjct: 121 KGSLLLIEGRSESNNNVANMMRKVKASEWLTDPNMQSI-VSQDDELRQLQRFSLRV 175