Pairwise Alignments

Query, 402 a.a., General secretion pathway protein F from Pseudomonas fluorescens FW300-N2E2

Subject, 406 a.a., general secretion pathway protein F (RefSeq) from Shewanella loihica PV-4

 Score =  342 bits (878), Expect = 9e-99
 Identities = 181/405 (44%), Positives = 274/405 (67%), Gaps = 3/405 (0%)

Query: 1   MPTFDYRAEDAQGRRCKGRVEADSPRHARQLLRERGLLPCELLAAKEPRTL---GGWHAG 57
           MP F+Y+A +AQG++ KG VEAD+ RHAR  LRE  L+P E+    E       GG+   
Sbjct: 1   MPAFEYKALNAQGKQQKGVVEADTARHARGQLRELRLMPLEITPVVEKEAKAKSGGFSFK 60

Query: 58  TWLSPADLALLTLQLSTLIQAGLPLEESLGAVAQQSQKRRVAHLLAAVRSRVMEGHALAT 117
             +S A+LAL+T Q++TL+ AGLP+EE+L AV QQ +K R+A ++ AVRSRV+EG++LA 
Sbjct: 61  RGISVAELALITRQIATLVAAGLPVEEALKAVGQQCEKDRLASMVMAVRSRVVEGYSLAD 120

Query: 118 ALRAFPQAFPELFCATVAAGEQSGHLGRVLEQLATYTQARQASRQRIQLALVYPLILMLA 177
           ++  FP  F +L+ A VA+GE+SGHL  VL +LA YT+ RQ  + ++  A++YP++L L 
Sbjct: 121 SMAEFPHIFDDLYRAMVASGEKSGHLEVVLNRLADYTERRQQLKTKMTQAMIYPIVLTLV 180

Query: 178 CVAIVAFLLGYVVPDVVKIFVDSGQPLPWLTQALIAMSDGLRRYGLLLLGALAGLLGLWR 237
            ++++A LL  VVP VV  F   GQ LPW TQ LIA SD +R YGL+++G +  L+   +
Sbjct: 181 AISVIAILLAAVVPQVVGQFEHMGQELPWTTQFLIASSDFVRDYGLIVIGVIIALVVGAK 240

Query: 238 WSLRQPAWRLRWHRLLLRLPLLGEVLRAMEAARFASTLAILSKSAVPLVEALHIAAQVIG 297
             LR  A R+++   +L++P++G V + +  ARFA TL+IL+ S+VPL++A+ IA++V+ 
Sbjct: 241 QLLRSAANRMKYDSAILKMPVVGRVSKGLNTARFARTLSILTASSVPLLDAMRIASEVLM 300

Query: 298 NLTIRARMADVARSVREGGTLTRGLELGGDIPPLMLHMIASGERAGELDSMLARAAEQQE 357
           N+ +RA + +    VREG +L   L      PP+ML+MI SGE++G+L+ ML RAA+ Q+
Sbjct: 301 NVRVRAAVEEATARVREGTSLGAALANTKLFPPMMLYMITSGEKSGQLEQMLERAADNQD 360

Query: 358 ASLAARIALVVSLFEPAMLVLMGGVVLLIVMAILLPILSLNQLVN 402
               + + + + +FEP ++V M  VVL IV+AIL PIL LN +++
Sbjct: 361 REFESNVNIALGVFEPMLVVSMAAVVLFIVLAILQPILELNNMIS 405