Pairwise Alignments

Query, 148 a.a., Excinuclease ATPase subunit from Pseudomonas fluorescens FW300-N2E2

Subject, 165 a.a., excinuclease ATPase subunit (RefSeq) from Shewanella loihica PV-4

 Score =  100 bits (249), Expect = 1e-26
 Identities = 59/145 (40%), Positives = 78/145 (53%), Gaps = 1/145 (0%)

Query: 3   LKKIAVTTALLLSTLPSLSQARDTALFLPFDKVVAEAIRTGKIDGSVKFYLAGNKPAGNV 62
           +KKI +     L+    L+ ARD         V+       K+   V FY  G +  G  
Sbjct: 2   MKKILLVGLTSLTLCSPLAFARDDVGNYNIASVLNSEAAKAKLGSDVSFYF-GEQAYGEP 60

Query: 63  TVVSPGAVTNKKTNAFNKSDEVACEWVLQSALISLHQAAKNAGANAVTNIVSFYKSNERK 122
                   TNKKTNAFNKSD+ ACEWV  SA+I+L  +A   G NA+ NI S YK+N   
Sbjct: 61  VQKLGELKTNKKTNAFNKSDQEACEWVFLSAMIALKNSALKQGGNAIVNIKSNYKNNLTS 120

Query: 123 DPTTYECHAGAIMAGVALKGDLAKV 147
              T++C AGA+MAGVAL G++ K+
Sbjct: 121 SEETFQCGAGALMAGVALTGEVVKL 145