Pairwise Alignments

Query, 197 a.a., FIG027190: Putative transmembrane protein from Pseudomonas fluorescens FW300-N2E2

Subject, 276 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 73.6 bits (179), Expect = 3e-18
 Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 16/162 (9%)

Query: 22  LQQLSDQLARPEVIHGQFIQEKHLRALPQPLTSKGRFVLAKNHGLLWLLQTPLQQDYRIT 81
           L  LS +L   E + G F+Q + L+ L +PL S+G+FV  K+ GL+W    P +    + 
Sbjct: 62  LLALSQKLNLGETVRGHFVQSRQLKVLKKPLISQGQFVFDKDQGLIWQQLAPFESLLILK 121

Query: 82  AQGIARRDGNAWQMLPNKSAGAEQ-------NRLFLAVLQGDSTGLQRDFELSLSGE--- 131
            + + +RD      + N  A A           L  A+L GD +GL   FEL    +   
Sbjct: 122 DKQLIQRDSQGRVQVSNADASASAAAMGDLLPSLVSAMLGGDISGLSNHFELHFLAQETL 181

Query: 132 ------PQQWKLTLTPRSVLLKQVFNQINIDGGELVQRIELL 167
                  + W+L LTP+  L+K+    + ++G + +  + LL
Sbjct: 182 TKEKSAKENWQLGLTPKDPLMKKAIANMVLEGSDTLHALVLL 223