Pairwise Alignments

Query, 359 a.a., Urea ABC transporter, permease protein UrtC from Pseudomonas fluorescens FW300-N2E2

Subject, 336 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas fluorescens SBW25-INTG

 Score =  137 bits (346), Expect = 3e-37
 Identities = 103/331 (31%), Positives = 154/331 (46%), Gaps = 43/331 (12%)

Query: 25  ILAVLLSLPLLSLLAADHPLHVSAYTLTLVGKILCYAIVALALDLVWGYAGLLSLGHGLF 84
           +LAVL+ LPL            +  + TL  +IL +A+ ALA +L+ GY GLLS G G+F
Sbjct: 21  VLAVLIGLPL------------TLPSATLATEILIFAMAALACNLLLGYTGLLSFGQGIF 68

Query: 85  FALGGYAMGMYLMRQAAGDGLPAFMTFLSWTELPWYWSGTDSFLWALCLVVLAPGLLALV 144
           F  G Y   + ++    G                           AL    +A G LAL+
Sbjct: 69  FGAGAYCAALLMIHLQLG------------------------LFTALLGAAIAGGFLALL 104

Query: 145 FGFFAFRSRIKGVYFSIMTQALTFAGMLLFFRNETGFGGNNGFTNF---RSILGFGITEP 201
            G  A R    G+YF ++T A +     + +      GG+NG  +       LG  +   
Sbjct: 105 VGALAIRRT--GIYFVMLTLAFSQMAYFVAYTLSDWTGGDNGLLSVPRPEIRLGDTVLLS 162

Query: 202 GTRAVLFFATVLLLVASLFIGWR-LARSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWV 260
              A  F+  V +L   +FIG R +  S FG  L A+R+ E R    GYD R FK+ V+V
Sbjct: 163 LADARAFYGFVAVLFLLIFIGARRVIASPFGSTLMAIRENETRASAIGYDTRHFKILVFV 222

Query: 261 LSAVLCGLAGALYVPQVGIINPSEMSPTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKS 320
           LS  + G+AGALY   +  +  S +    S    +   +GG G+L G LLGAG +  +  
Sbjct: 223 LSGAVTGIAGALYAMLLHFVPLSNIDLAMSENILIMTIVGGTGSLFGSLLGAGSIVLLGD 282

Query: 321 WFTVAFPEYWLFFLGALFIVVTLYLPKGVIG 351
           + +  +P  WL  LG + I+V +++  G+ G
Sbjct: 283 FLSDLWPR-WLMLLGVILILVVIFMRGGLWG 312