Pairwise Alignments

Query, 929 a.a., Sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

Subject, 933 a.a., hybrid sensory histidine kinase BarA (RefSeq) from Shewanella loihica PV-4

 Score =  268 bits (686), Expect = 9e-76
 Identities = 171/538 (31%), Positives = 285/538 (52%), Gaps = 31/538 (5%)

Query: 383 SISRDLAASNA--EINAKAEFLAKISHEIRTPMNGVLGMTELLLGTPLSVKQRDYVQTIH 440
           ++  DLA   A      K+EFLA +SHE+RTP+NGV+G  + LL TPL   Q+DY++TI 
Sbjct: 286 NVELDLAKKRALEASRIKSEFLANMSHELRTPLNGVIGFAKQLLKTPLHASQQDYIKTIE 345

Query: 441 SAGNELLTLINEILDISRLESGQIELDDVQFDLNALIEDCLSIFRAKAEQQNVELISFIQ 500
            +   LL +IN+ILD S+LE+G++EL+++ F L  +I+D +S+    A+++++EL+  I+
Sbjct: 346 KSATNLLGIINDILDFSKLEAGKMELENMPFALREVIDDTISLLANSAKEKDLELVVDIE 405

Query: 501 PQVPRVISGDPTRLRQALLSLLENALKKTDEGEVLIVVAL-DERSNQPRLRIAVQDSGTP 559
           P +   +SGD  R+ Q + +L+ NA+K TD G V + + L  E + +  +R  + D+G  
Sbjct: 406 PSINDNVSGDALRVSQVITNLVGNAIKFTDSGSVHLKMRLTSEEAEKVNVRCEITDTGIG 465

Query: 560 MDAEERDTLMHAELHSKNFLSATRLGGNLGLVIARQLIILMHGEFGIKSGSNQGSTLWLT 619
           +D   +  L  A   + + +S    G  LGL+I ++LI  M G+ G  S   +GST W T
Sbjct: 466 IDKPHQAQLFQAFGQADSSISRRFGGTGLGLIITKRLINRMGGQIGCISAPGKGSTFWFT 525

Query: 620 LP--LDPDRLEHPTADLDGPLQGARVLIVDDNDTCRKVLVQQCSAWGLNVSAVPSGKEAL 677
           LP  L P  +  P  + D  L    VL+ +  +  RKV     S WG+   ++ + ++  
Sbjct: 526 LPLKLSPYPISQP-LETDN-LIDKTVLLFEPRELSRKVHESLLSHWGMQNISITTAED-- 581

Query: 678 ALLRTKAHLRDYFDVVLLDQN----MPGMTG-MQLAAKIKEDPSLNHDILLIMLTGISNA 732
            L R       +FD  ++  N     P +   +   AKI +          + L   +++
Sbjct: 582 -LARVAGEEGRHFDYAIISCNDLASSPNLLNVLNKIAKISD--------YTLYLCSSTDS 632

Query: 733 PSKIVARNSGVKRILAKPVAGYTLKTTLADELNQRNRGQATNVQVNAGPPLPVKVPSDFR 792
            +K+      V +++  PV    L  TL +    +         V        +      
Sbjct: 633 AAKMSLIQPNVDKVMQAPVGERALAVTLINPHRAQYEAMPFQEAVK-----ETQEREPMS 687

Query: 793 ILVAEDNSISTKVIRGMLGKLNLQPDTASNGEEALKAMKEQRYDLVLMDCEMPILDGFSA 852
           +L  +DN  + K+I+ +L +L  Q     NG+EA++  K + +DL+ MD +MP  DGFSA
Sbjct: 688 VLAVDDNPANLKLIKTLLKELVTQVTVTDNGQEAVEIAKAKSFDLIFMDIQMPGTDGFSA 747

Query: 853 TQQLRAWEMGNQRTRTPVVALTAHILAEHKERARQAGMDGHMAKPVELSQLRELIEHW 910
           T+Q+R   +      TP+VA+TAH +AE +ER  Q+GMDG++ KP++ + L+ +I  W
Sbjct: 748 TKQIREHSLNR---NTPIVAVTAHAIAEERERIDQSGMDGYLPKPIDEAALKSVISRW 802