Pairwise Alignments

Query, 929 a.a., Sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

Subject, 1230 a.a., PAS/PAC sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  254 bits (648), Expect = 3e-71
 Identities = 162/523 (30%), Positives = 280/523 (53%), Gaps = 22/523 (4%)

Query: 398  KAEFLAKISHEIRTPMNGVLGMTELLLGTPLSVKQRDYVQTIHSAGNELLTLINEILDIS 457
            K+EFLA +SHEIRTPMN ++GM +L   T L+ +Q DY+     +   LL +IN+ILD S
Sbjct: 722  KSEFLANMSHEIRTPMNAIIGMLQLASRTQLTPQQADYLDKAGFSAQSLLRIINDILDFS 781

Query: 458  RLESGQIELDDVQFDLNALIEDCLSIFRAKAEQQNVELISFIQPQVPRVISGDPTRLRQA 517
            ++E+G++EL+ V F L+ +++  L +   KA+++ VEL+ +       ++ GDP RL Q 
Sbjct: 782  KIEAGKLELERVAFPLDKVLDHALDLNALKAQEKGVELLLYAPVTAGLILEGDPLRLGQV 841

Query: 518  LLSLLENALKKTDEGEV-LIVVALDERSNQPRLRIAVQDSGTPMDAEERDTLMHAELHSK 576
            L+++L NA+K T  GE+ L    + ER ++  L+  V+D+G  +  E++++L  A   + 
Sbjct: 842  LINMLSNAVKFTQSGEIELGCEDVGERDHRITLKFWVRDTGIGISKEQQESLFDAFAQAD 901

Query: 577  NFLSATRLGGNLGLVIARQLIILMHGEFGIKSGSNQGSTLWLTLPLD-PDRLEHPTADLD 635
               +    G  LGL I++ L+ +M G   ++S    GST   T+  +  +  E     + 
Sbjct: 902  GSTTRKYGGTGLGLSISKHLVSMMGGTMQVQSELGVGSTFSFTISFEIAEEAEVKPLIVP 961

Query: 636  GPLQGARVLIVDDNDTCRKVLVQQCSAWGLNVSAVPSGKEALALLRTKAHLRDYFDVVLL 695
              +   + L+VDDN T  ++       +  +V    +G EAL  L  +       D++LL
Sbjct: 962  EVIGNLKTLVVDDNPTALQIYSTAMRDFHFDVDTASNGAEALYKLEHRP-----VDLLLL 1016

Query: 696  DQNMPGMTGMQLAAKIK---EDPSLNHDILLIMLTGISNAPSKIVARNSGVKRILAKPVA 752
            D  MP M G+++   +     D  L    ++IM+T  ++ P K    +  +  +L KP  
Sbjct: 1017 DWMMPEMDGVEVIKALDAMVADGRLEKRPVIIMMTAYASEPLKEDLDDLDIYAMLQKPFK 1076

Query: 753  GYTLKTTLADELNQRNRGQATNVQVNAGPPLPVK--VPSDFRILVAEDNSISTKVIRGML 810
                 + L DE+           ++N    LPV+       +IL+ EDN I+ +V   +L
Sbjct: 1077 A----SALFDEI---IAAFIDKPKINPAAALPVEGNATGTGQILLVEDNFINQQVATELL 1129

Query: 811  GKLNLQPDTASNGEEALKAMKEQRYDLVLMDCEMPILDGFSATQQLRAWEMGNQRTRTPV 870
                 + D A NG+ AL  +  ++YD VLMD +MP++DG +AT++LR       +   PV
Sbjct: 1130 KSAGYEVDVAENGQVALDMVDAKQYDAVLMDIQMPVMDGLTATKELR---KRYTKEELPV 1186

Query: 871  VALTAHILAEHKERARQAGMDGHMAKPVELSQLRELIEHWVAQ 913
            +A+TAH ++  +E++  AGM+ H+ KP+ L++L + +  W+ +
Sbjct: 1187 IAMTAHAMSGDREKSLAAGMNAHITKPIVLNELFDTLAQWIVR 1229