Pairwise Alignments

Query, 929 a.a., Sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

Subject, 1765 a.a., sensory box histidine kinase/response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  301 bits (771), Expect = 2e-85
 Identities = 177/518 (34%), Positives = 296/518 (57%), Gaps = 14/518 (2%)

Query: 391  SNAEINAKAEFLAKISHEIRTPMNGVLGMTELLLGTPLSVKQRDYVQTIHSAGNELLTLI 450
            ++A   AK +FLA +SHEIRTPMN ++GM++L L T L  KQ++Y++ I  A   LL++I
Sbjct: 1033 ADAASKAKGDFLANMSHEIRTPMNAIIGMSQLCLQTQLDKKQKNYLEKIERASQSLLSII 1092

Query: 451  NEILDISRLESGQIELDDVQFDLNALIEDCLSIFRAKAEQQNVELISFIQPQVPRVISGD 510
            N+ILD S++E+G++++++V F L+ ++ED   +F  +A Q+ +EL+  + P VPR + GD
Sbjct: 1093 NDILDFSKIEAGKLDIENVSFQLDTMLEDLSDMFSERAAQKQIELLFAVAPNVPRHLLGD 1152

Query: 511  PTRLRQALLSLLENALKKTDEGEVLIVVALDERSNQP-RLRIAVQDSGTPMDAEERDTLM 569
            P RL Q L++L+ NA+K T+ GEVL+ ++L E+ N    LR +V+DSG  +  E++  L 
Sbjct: 1153 PLRLGQVLINLMNNAIKFTERGEVLLSLSLVEQQNDDVVLRFSVRDSGIGLTQEQQSKLF 1212

Query: 570  HAELHSKNFLSATRLGGNLGLVIARQLIILMHGEFGIKSGSNQGSTLWLTLPLDPDRLEH 629
             +   +    +    G  LGL I++QL+ LM G  G++S    GST + T+ L     + 
Sbjct: 1213 KSFTQADTSTTRKYGGTGLGLAISKQLVELMGGSIGVESQLGHGSTFFFTVKLCISSGQK 1272

Query: 630  PTADLDGPLQGARVLIVDDNDTCRKVLVQQCSAWGLNVSAVPSGKEALALLRTKAHLRDY 689
                 +  L G  +L+ DDN T R ++     + G NV  V SG EA+         +  
Sbjct: 1273 LFVGQE--LDGMSILVADDNATARDIMRTTLESMGFNVDTVRSGDEAIMRCS-----QQE 1325

Query: 690  FDVVLLDQNMPGMTGMQLAAKIKEDPSLNHDILLIMLTGISNAPSKIVARNSGVKRILAK 749
            + V L+D  MP + G++ A +IK+       IL  M++  +N          G+   ++K
Sbjct: 1326 YAVALIDWKMPNLDGIETAKQIKQQTKNAPRIL--MVSAHANQDFLTQIEQLGLAGYISK 1383

Query: 750  PVAGYTLKTTLADELNQRNRGQATNVQVNAGPPLPVKVPSDFRILVAEDNSISTKVIRGM 809
            P++   L   + + L +         Q N  P L + +    RIL+ EDN ++ +V    
Sbjct: 1384 PISASRLLDGIMNALGRSGILPVRRHQDNIAPELLLPLKGK-RILLVEDNEMNLEVATEF 1442

Query: 810  LGKLNLQPDTASNGEEALKAMKEQRYDLVLMDCEMPILDGFSATQQLRAWEMGNQRTRTP 869
            L ++ +    A+NG+ AL  + +Q +DLVLMDC+MP++DG+ AT+ +R      +  + P
Sbjct: 1443 LEQVGIILSIATNGQIALDKLAQQSFDLVLMDCQMPVMDGYQATKAIR---QRPELAQLP 1499

Query: 870  VVALTAHILAEHKERARQAGMDGHMAKPVELSQLRELI 907
            V+A+TA+ +A  KE   +AGM+ H+AKP+E++ L + +
Sbjct: 1500 VIAMTANAMAGDKEMCLRAGMNDHIAKPIEVNLLYQTL 1537