Pairwise Alignments

Query, 648 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

Subject, 630 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  175 bits (444), Expect = 5e-48
 Identities = 113/353 (32%), Positives = 184/353 (52%), Gaps = 2/353 (0%)

Query: 298 IQGVMIGLILLIALLIDTLQRRLARTLTHLAPALSTWAEGDFSRDIRVGASNR--ELQDI 355
           +  V +GL+++  L++  + +   + L  +A AL+  AEGD    +R+  +N   E+  +
Sbjct: 278 MSAVGVGLLVIFGLVLVAIFKMQFKDLERVALALNDIAEGDGDLTVRIHTANSHDEIGIL 337

Query: 356 EASLNRLRAYLVDLVGTIRVNAEQVAGSSRALAELSGELHGGAEDQASDTALIRDSLSEL 415
            +  NR    L  ++  +   A Q+   ++  +  + +     E Q  +  ++  +++E+
Sbjct: 338 ASGFNRFVERLHGMISRMHNIAGQLEYQAKGSSASAADNSQRIEVQQDEVTMVATAVTEM 397

Query: 416 EATIQQVAGDASQAADASRSAGHAVEQGQKVIGLSLTGLHALVGEVQGNAQMIEQLAEES 475
            +  +++A +A   A  +++A      GQK +  S   +  L  EV    ++I +L E S
Sbjct: 398 ASATEEIASNAEHTAQTAQNAVSLSNHGQKQVMQSQQSIRNLANEVDTAGRIISELNEHS 457

Query: 476 ATIGGVLTVIRSIADQTNLLALNAAIEAARAGEMGRGFAVVAEEVRSLAQRTTGATAEIQ 535
             I  +L  I  IA+QTNLLALNAAIEAARAGE GRGFAVVA+EVR L+QRT  +T EIQ
Sbjct: 458 QKINSILLTISGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHSSTQEIQ 517

Query: 536 TLIARLQQAARQSVDGMRAQVEHAEATANQAQAADGALDQIVGAIQTIADTAVRIADVTA 595
            +I  LQQ A ++V  M    + AE +   A +A  +L QI  AI  I+D A +IA    
Sbjct: 518 AMIETLQQTAGKAVKSMTQSHDMAETSVADANSASESLLQISKAINEISDMASQIATAAE 577

Query: 596 QQSGAVSEIRDHSERIHQLGGDNLLRIGQGREQGDNLLVLGGRLHTAVQAFRV 648
           +Q+   SEI  ++E I ++  +  +       Q   L  L   L   V  F++
Sbjct: 578 EQTSVTSEINRNTESIREVSENLSIEAQSAMVQSQELAHLAASLQQEVSRFKL 630