Pairwise Alignments

Query, 193 a.a., FIG000605: protein co-occurring with transport systems (COG1739) from Pseudomonas fluorescens FW300-N2E2

Subject, 204 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 91.7 bits (226), Expect = 8e-24
 Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 8/184 (4%)

Query: 13  EEIRKSRFITFAAPISSPADAQAFID--QHSDLNASHNCWAWKLGDQYR-----SNDDGE 65
           EEI+ SRFI+F     S    +  +   +     A+H C+A+  G         S+DDGE
Sbjct: 16  EEIKHSRFISFLFHCPSEDVLKCVLTNIKAEYPGANHYCYAFIAGAPDNNVAMGSSDDGE 75

Query: 66  PGGTAGRPILAAIEAQACDQVAVLVIRWYGGIQLGTGGLARAYGGGANKCLQNAEKIELI 125
           P G+AGRP+LA+++     ++  +V+R++GG +LG GGL RAY  G  + L   E     
Sbjct: 76  PSGSAGRPMLASLQGAEIGEIGAVVVRYFGGTKLGVGGLVRAYSSGIKQGLAQLETEIKQ 135

Query: 126 SRVALRCSCGFAELALVKLRVAECGGLVNEERFTANGVDLQLAVGEAQIETLQTHLADLS 185
            R   R +C + +L  V+  +  C GLV ++ FT + V L   + +A        LA LS
Sbjct: 136 IRYPGRLACDYHQLKDVEHFLELCEGLVVDKVFT-DRVSLSFEMPKATQSRFNQELATLS 194

Query: 186 RGRI 189
           +GR+
Sbjct: 195 QGRL 198