Pairwise Alignments

Query, 193 a.a., FIG000605: protein co-occurring with transport systems (COG1739) from Pseudomonas fluorescens FW300-N2E2

Subject, 204 a.a., conserved hypothetical protein TIGR00257 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 97.1 bits (240), Expect = 2e-25
 Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 8/187 (4%)

Query: 10  EYREEIRKSRFITFAAPISSPADAQAFI-DQHSDL-NASHNCWAWKLGDQ-----YRSND 62
           +  EEI+ SRFI+F    +S    +  + D   D   ASH C+A+  G         S+D
Sbjct: 13  QIEEEIKYSRFISFLFHCNSLEQLKLVLTDIKRDYPGASHYCYAFIAGAPNDSMLIGSSD 72

Query: 63  DGEPGGTAGRPILAAIEAQACDQVAVLVIRWYGGIQLGTGGLARAYGGGANKCLQNAEKI 122
           DGEP G+AGRP+LA ++  +  ++  +V+R+YGG +LG GGL RAY  G  + L      
Sbjct: 73  DGEPAGSAGRPMLAVLQGASIGEIGAVVVRYYGGTKLGVGGLVRAYTSGLRQGLAQLPTQ 132

Query: 123 ELISRVALRCSCGFAELALVKLRVAECGGLVNEERFTANGVDLQLAVGEAQIETLQTHLA 182
               R      C + +L  V+  + +   ++ +++F A  VD+  A+G+ Q   L   LA
Sbjct: 133 LKQLRYPATLRCDYTQLRNVEHLLQQLDAVITDKQF-AEAVDIHFAIGKQQQRLLTESLA 191

Query: 183 DLSRGRI 189
            LS+G +
Sbjct: 192 TLSQGSL 198