Pairwise Alignments

Query, 328 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 567 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  335 bits (860), Expect = 1e-96
 Identities = 168/262 (64%), Positives = 207/262 (79%)

Query: 1   MSTPVLHVEDLSVIAGHGEDEVTLVDRVSFDLAKGEILGLVGESGSGKTMACRALMRLLP 60
           MS  VL V DL+V A    +  TL+D +S DLAKGEILGLVGESGSGK++ CRAL+RLLP
Sbjct: 1   MSASVLSVRDLTVKAHLQGETRTLLDGISLDLAKGEILGLVGESGSGKSLFCRALVRLLP 60

Query: 61  SANLRVQGKALRLAGEDLLSLDEAGMRGIRGRRLGMIFQNPGSHLDPLMRIGEQIGEGIR 120
           S+ L+++G A+ L G DL ++ +A M  +RG  +GMIFQNP SHLDP+MRIG+QI EGIR
Sbjct: 61  SSLLKIEGGAVLLGGRDLTAVTDAEMLEVRGAEIGMIFQNPTSHLDPVMRIGDQIAEGIR 120

Query: 121 LHQGASKREARAKAIDVLRQVGIPDPLTRVDSYPHEFSGGMRQRAMIAVALGCNPQVLIA 180
            HQG   R+ARA A+++L Q+G P+P+ + DSYPHE SGGMRQRAMI VAL CNPQ+LIA
Sbjct: 121 YHQGLGGRDARAAAVEILGQIGFPEPVRQYDSYPHELSGGMRQRAMIGVALSCNPQILIA 180

Query: 181 DEPTTALDVTVQAQILRLLLDLRDQRGLSIIMITHDLGIVAQTCDSIAVMYAGRLCEHGN 240
           DEPTTALDVT+QAQIL+LL+D+RD+RGLSII+ITHDLGIVAQTCD IAVM  G+L E G 
Sbjct: 181 DEPTTALDVTIQAQILKLLMDIRDRRGLSIILITHDLGIVAQTCDRIAVMRGGKLLEQGP 240

Query: 241 KLDLLAHPRHPYTAALIDCQPA 262
           K  +L+ P+ PYT  LI   P+
Sbjct: 241 KRTILSAPQDPYTVRLIHSHPS 262



 Score =  150 bits (379), Expect = 7e-41
 Identities = 95/274 (34%), Positives = 143/274 (52%), Gaps = 16/274 (5%)

Query: 5   VLHVEDL--------SVIAGHGEDEVTLVDRVSFDLAKGEILGLVGESGSGKTMACRALM 56
           +L ++DL        S+  G     V+ V  +S  +  GE +G+VGESGSGK+   RA++
Sbjct: 284 LLEIDDLHVRFPSGGSLFRGKNARAVSAVSGISLRIMPGETVGIVGESGSGKSTLARAML 343

Query: 57  RLLPSANLRVQGKALRLAGEDLLSLDEAGMRGIRGRRLGMIFQNPGSHLDPLMRIGEQIG 116
            L P     +    +   G DL     AG+  +R     M+FQ+P + L+P + IG+ + 
Sbjct: 344 GLTP-----ISAGHVSFDGIDLSQQRGAGLTRLR-HESAMVFQDPFNALNPRLTIGQTLA 397

Query: 117 EGIRLHQGASKREARAKAIDVLRQVGIPDPLTRVDSYPHEFSGGMRQRAMIAVALGCNPQ 176
           E +++ +     +  A+  ++L  VG+          P   SGG  QRA IA AL  +P+
Sbjct: 398 EVLKVQKKIGGADIPARIGELLDLVGLEREFAH--RKPRSMSGGQCQRAGIARALAVDPR 455

Query: 177 VLIADEPTTALDVTVQAQILRLLLDLRDQRGLSIIMITHDLGIVAQTCDSIAVMYAGRLC 236
           ++IADE   ALDVT+QAQI+ L   L     L++I I HDL IV   C+   VM+ G + 
Sbjct: 456 LIIADECVAALDVTIQAQIVDLFRKLARDLNLTLIFIAHDLAIVRNLCERTVVMHRGEII 515

Query: 237 EHGNKLDLLAHPRHPYTAALIDCQPATSAGHAML 270
           E G   D+ + P+HPYTAALI   P      ++L
Sbjct: 516 EEGRSEDVFSRPKHPYTAALIAAIPDIDPDRSLL 549