Pairwise Alignments

Query, 328 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 326 a.a., putative dipeptide transport ATP-binding protein DppD from Phaeobacter inhibens DSM 17395

 Score =  293 bits (751), Expect = 3e-84
 Identities = 155/322 (48%), Positives = 217/322 (67%), Gaps = 2/322 (0%)

Query: 1   MSTPVLHVEDLSVIAGHGEDEVTLVDRVSFDLAKGEILGLVGESGSGKTMACRALMRLLP 60
           M+ PVL + DL V        +   D+VS+D+A GEILG+VGESG+GK+MA  A++ LL 
Sbjct: 1   MTDPVLSIRDLVVEIPTRHARLCATDKVSYDIAPGEILGVVGESGAGKSMAGNAVIGLL- 59

Query: 61  SANLRVQGKALRLAGEDLLSLDEAGMRGIRGRRLGMIFQNPGSHLDPLMRIGEQIGEGIR 120
           +   R+ G  +RL G+ + +L    MR +RG+ +GMIFQ+P + L+PL+RIG+Q+ E + 
Sbjct: 60  NPPARITGGEIRLNGQRIDNLPREKMRRLRGKEIGMIFQDPLTSLNPLLRIGDQLTETMM 119

Query: 121 LHQGASKREARAKAIDVLRQVGIPDPLTRVDSYPHEFSGGMRQRAMIAVALGCNPQVLIA 180
            H   +K EARA+AI  L +VGIP    R+DSYPHEFSGGMRQR +IA+AL   P ++IA
Sbjct: 120 EHLELTKPEARARAIAALEEVGIPAASERIDSYPHEFSGGMRQRVVIALALCAEPSLIIA 179

Query: 181 DEPTTALDVTVQAQILRLLLDLRDQRGLSIIMITHDLGIVAQTCDSIAVMYAGRLCEHGN 240
           DEPTTALDV+VQAQI+ LL  L  +RG ++++ITHD+G++A+  D +AVMYAGR+ E G+
Sbjct: 180 DEPTTALDVSVQAQIIALLKRLCRERGTAVMLITHDMGVIAEAADRVAVMYAGRMAEIGD 239

Query: 241 KLDLLAHPRHPYTAALIDCQPATSAGHAMLKTIAGQPPLLDALPSGCRFNPRCLQQGSQC 300
             D++  PRHPYT  L+   P+ SAG   L+ I G  P L +LP GC F+PRC +   +C
Sbjct: 240 VRDVVTRPRHPYTDGLMGSTPSASAGQHRLRQIPGAMPRLHSLPPGCAFSPRCERANERC 299

Query: 301 TRLLPQMQVTAEAHRVACHYPL 322
            R  P   + A+  R AC + +
Sbjct: 300 -RNSPPPTLEADNGRSACWHAI 320