Pairwise Alignments

Query, 160 a.a., tmRNA-binding protein SmpB from Pseudomonas fluorescens FW300-N2E2

Subject, 159 a.a., SsrA-binding protein from Sinorhizobium meliloti 1021

 Score =  118 bits (295), Expect = 5e-32
 Identities = 62/147 (42%), Positives = 97/147 (65%), Gaps = 2/147 (1%)

Query: 12  IAQNKKARHDYFIEQRFEAGMVLAGWEVKSLRAGKAQLVDSYVLLKDGEAWLLGSHITPL 71
           +A+N+KAR +Y I   +EAG+VL G EVKSLR GKA + +SY   + GE WL+ S++ P 
Sbjct: 14  VAENRKARFNYEIVDTYEAGLVLTGTEVKSLREGKANIAESYATDEGGEIWLINSYL-PE 72

Query: 72  TTASTHVIADPVRSRKLLLNKRELEKLFASVQQKGYTCVCTSLYWSKH-LIKCEIALGKG 130
              +     +  R RKLLL+KRE+ +L  +V ++G + +   +Y+++   +K E+ALGKG
Sbjct: 73  YLQANRFNHETRRRRKLLLSKREVNRLQGAVNREGMSLIPLRIYFNERGRVKLELALGKG 132

Query: 131 KKEYDKRDTERERDAGRELQRAVRNKG 157
           KK +DKR+T +ERD  R+  R ++ +G
Sbjct: 133 KKLHDKRETSKERDWNRQKNRLLKERG 159