Pairwise Alignments

Query, 160 a.a., tmRNA-binding protein SmpB from Pseudomonas fluorescens FW300-N2E2

Subject, 153 a.a., SsrA-binding protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  127 bits (318), Expect = 1e-34
 Identities = 71/147 (48%), Positives = 96/147 (65%), Gaps = 1/147 (0%)

Query: 5   KKHPTGTIAQNKKARHDYFIEQRFEAGMVLAGWEVKSLRAGKAQLVDSYVLLKDGEAWLL 64
           KK     IAQNKKARH Y ++   EAG+VL G EVKSLRAG     DSYV  ++GEA+L+
Sbjct: 3   KKPSPALIAQNKKARHLYELDDFMEAGLVLTGSEVKSLRAGHVNFRDSYVDFRNGEAFLV 62

Query: 65  GSHITPLTTASTHVIADPVRSRKLLLNKRELEKLFASVQQKGYTCVCTSLYWSKHLIKCE 124
           G HI P   A  +   DP R RKLLL+ +++  L   V QKG T V  +L++SK  +K E
Sbjct: 63  GLHIAPYDNAG-YAQHDPDRDRKLLLHAKQINTLALRVAQKGLTVVPVNLHFSKGRVKVE 121

Query: 125 IALGKGKKEYDKRDTERERDAGRELQR 151
           IA+G+GKK +D+R+  ++R A R+ +R
Sbjct: 122 IAVGRGKKLHDQREDLKKRAADRDTER 148