Pairwise Alignments

Query, 160 a.a., tmRNA-binding protein SmpB from Pseudomonas fluorescens FW300-N2E2

Subject, 160 a.a., SsrA-binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  115 bits (288), Expect = 3e-31
 Identities = 62/144 (43%), Positives = 95/144 (65%), Gaps = 2/144 (1%)

Query: 12  IAQNKKARHDYFIEQRFEAGMVLAGWEVKSLRAGKAQLVDSYVLLKDGEAWLLGSHITPL 71
           IA+N++AR +Y IE+  E G+VL G EVKSLR G + + +SY  + DGE WL+ S+I P 
Sbjct: 15  IAENRRARREYAIEEDLEVGIVLEGSEVKSLREGGSNIAESYATVDDGELWLVNSYIAPY 74

Query: 72  TTASTHVIADPVRSRKLLLNKRELEKLFASVQQKGYTCVCTSLYWS-KHLIKCEIALGKG 130
             A T    +  R RKLL+++REL +L+ + Q++G T V   +Y++ + L+K +I + KG
Sbjct: 75  AQAKTWK-HEERRRRKLLVSRRELSRLWNATQRQGMTLVPLVMYFNHRGLVKLKIGVAKG 133

Query: 131 KKEYDKRDTERERDAGRELQRAVR 154
           KK  DKR T+ +RD  R+ QR ++
Sbjct: 134 KKLADKRQTDAKRDWNRQKQRLLK 157