Pairwise Alignments

Query, 160 a.a., tmRNA-binding protein SmpB from Pseudomonas fluorescens FW300-N2E2

Subject, 163 a.a., SsrA-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score =  151 bits (382), Expect = 4e-42
 Identities = 75/153 (49%), Positives = 107/153 (69%), Gaps = 1/153 (0%)

Query: 5   KKHPTGTIAQNKKARHDYFIEQRFEAGMVLAGWEVKSLRAGKAQLVDSYVLLKDGEAWLL 64
           KK    TIA+NK+A  +Y  E++ EAG+ L GWEVKS+R GK  L D YV LK+GEA++ 
Sbjct: 7   KKAAPATIARNKRATFEYRFEEKMEAGISLMGWEVKSIRMGKVNLSDCYVFLKNGEAFMH 66

Query: 65  GSHITPLTTASTHVIADPVRSRKLLLNKRELEKLFASVQQKGYTCVCTSLYWSKHL-IKC 123
           G  I PL TASTHV+ DP+R +KLLL+++EL+KL   V+++GY+ +  S+YW K   +K 
Sbjct: 67  GCTIIPLNTASTHVVCDPIRLKKLLLSRKELDKLAGLVERQGYSIIPISMYWRKGAWVKV 126

Query: 124 EIALGKGKKEYDKRDTERERDAGRELQRAVRNK 156
           EI LGKGKK++DKR+  + R+   E  R ++ +
Sbjct: 127 EIGLGKGKKDHDKREDTKAREWEVEKARVMKKE 159