Pairwise Alignments

Query, 493 a.a., Transcription termination protein NusA from Pseudomonas fluorescens FW300-N2E2

Subject, 542 a.a., transcription elongation factor NusA from Sinorhizobium meliloti 1021

 Score =  411 bits (1057), Expect = e-119
 Identities = 208/467 (44%), Positives = 319/467 (68%), Gaps = 3/467 (0%)

Query: 4   EVLLVVESVSNEKGVPANVIFEALELALATATKKRFEDEVDLRVEINRHTGAYETFRRWT 63
           E+L + ++V+ EK +   ++  A+  A+  A + R+  E ++R +IN  TG     R   
Sbjct: 9   ELLQIADAVAREKVIDREIVLAAMADAIQKAARSRYGSESNIRADINPKTGEIRLQRLLE 68

Query: 64  VVEEADLDDPAIETWPSKVAETHPGAKVGDVVEEKIESIEFGRIAAQTAKQVIVQKVREA 123
           VVE+A+  D + +       + +P AK+GD + + +  ++FGRIAAQ+AKQVIVQKVREA
Sbjct: 69  VVEKAE--DYSTQIPIELARDRNPDAKLGDFIADPLPPMDFGRIAAQSAKQVIVQKVREA 126

Query: 124 ERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVRLRA 183
           ER +  D +++R+GEI++GTVK+V   NVIVDLG   E ++ R+++I RE  R G R+RA
Sbjct: 127 ERDRQYDEFKDRVGEIVNGTVKRVEYGNVIVDLGRG-EGIIRRDEMIPRENMRYGDRVRA 185

Query: 184 LLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAVRSK 243
            + ++R E RGPQ+ LSRT P+ +++LF +EVPEI +G+I++ + +RDPGSRAKIAV S 
Sbjct: 186 FVYDVRREQRGPQIFLSRTHPQFMVKLFTMEVPEIYDGIIQIKSVARDPGSRAKIAVVSN 245

Query: 244 DKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIVDED 303
           D  IDP GAC+GMRGSRVQAV GEL GE++DI+ W  +PA F++NA+ PAEVA +++DED
Sbjct: 246 DSSIDPVGACVGMRGSRVQAVVGELQGEKIDIIPWSPDPASFIVNALQPAEVAKVVLDED 305

Query: 304 AHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRNFIE 363
           A  +++ V  + L+ AIGR GQNVRLASQLTGW ++++TE +   ++Q E  +  + F++
Sbjct: 306 AERIEVVVPDEQLSLAIGRRGQNVRLASQLTGWDIDILTEQEESERRQKEFNERTQLFMD 365

Query: 364 ELEVDEELAQVLVDEGFTSLEEIAYVPVEEMLNIDGFDEEIVNELRARAKDRLLTKAIAT 423
            L+VDE + QVL  EGF  +EE+AYV ++E+ +I+GFDE+  NEL+ RA++ L       
Sbjct: 366 ALDVDEMVGQVLASEGFAQVEELAYVELDEISSIEGFDEDTANELQTRAREYLEKIEAEM 425

Query: 424 EEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLL 470
           + K  +   +++L +++G+   + + L   G+ T ED A  + DDL+
Sbjct: 426 DAKRKELGVSDELRTIDGLTSQMLVALGEEGIKTIEDFAGCAADDLV 472