Pairwise Alignments

Query, 186 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD from Pseudomonas fluorescens FW300-N2E2

Subject, 183 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Enterobacter sp. TBS_079

 Score =  203 bits (516), Expect = 2e-57
 Identities = 103/176 (58%), Positives = 121/176 (68%), Gaps = 2/176 (1%)

Query: 7   SGWCEGVRHCPSPNFNARPEGEI-SLLVIHNISLPPAQFATGKVQEFFQNRLDVTEHPYF 65
           +GW    RH PSP+ + RPE E  +LLV+HNISLPP +F    +   F   LD   HP+F
Sbjct: 5   NGWLVDARHVPSPHHDCRPEDEKPTLLVVHNISLPPGEFGGPWIDALFTGTLDPDAHPFF 64

Query: 66  VGIADLRVSAHFLIERDGAVTQFVSCLDRAWHAGVSCFEGREACNDFSLGIELEGTDDLP 125
             IA LRVSAH LI RDG V Q+V    RAWHAGVS ++GRE CNDFS+GIELEGTD  P
Sbjct: 65  AEIAHLRVSAHCLIRRDGEVVQYVPFDKRAWHAGVSMYQGRERCNDFSIGIELEGTDTTP 124

Query: 126 FTDAQYVALVDLTRQLQAAFRAITVQRICGHSDIAPGRKTDPGPAFDWVRYRAALT 181
           +TD+QY  LV +T+ L   + AI    I GHSDIAP RKTDPGPAFDW R+RA LT
Sbjct: 125 YTDSQYQQLVAVTQTLIGLYPAI-AGNITGHSDIAPARKTDPGPAFDWPRFRALLT 179