Pairwise Alignments

Query, 278 a.a., AmpE protein from Pseudomonas fluorescens FW300-N2E2

Subject, 286 a.a., regulatory protein AmpE (RefSeq) from Shewanella amazonensis SB2B

 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 70/288 (24%), Positives = 117/288 (40%), Gaps = 19/288 (6%)

Query: 1   MSFLVLLLAVWIEKFSALRQRVQRDGG--------WLHELNKLEASPRWVNRPWLVLTVM 52
           M+   LL+A+  E+   L +  Q D          W  E  + +AS   V          
Sbjct: 1   MALFSLLMAILAERLKFLPETWQFDTLISKLHRRLWKDEFTQGQASEFQV-------LFA 53

Query: 53  VLLPVALLALLLWVLEPVAYGLLALPVHLLVVIYSLGRGDLLAGLGPFRDAWRREDLQAA 112
           +LLP  L+ L L V+  +A+G+L L V +L  +      +       +  A  R D QA 
Sbjct: 54  LLLPAVLVYLALIVVSGIAWGMLTLAVWVLTAMVCFSHQEQRKAFKRYIQAACRGDTQAC 113

Query: 113 -AHVAKRDLD--IEANDGEQLLERVQGHLLWQAYQSFFAVIFWYFVLGPVAALSYRLLAL 169
             H ++ D    +EA   ++L  +V   + W  Y+ + AV  +   LGPVAA+ Y  +  
Sbjct: 114 YRHGSELDCSSCLEAVTADELGLKVGQSVAWINYRFYGAVALYLIALGPVAAVLYCSVRY 173

Query: 170 AAEHSQNPGV-AERAAQMRHAFDWVPVRLLAASFALVGNFVAVSRVMLHELLNWNISAAD 228
             +  +   +       +    DW+P R+ A  F L G F +          + +  A  
Sbjct: 174 YEQMQKRSNLQLPYVDALLTVLDWLPSRIFAFGFVLAGQFSSAFNRWRKLAFDPSTPARQ 233

Query: 229 LIDKVGLVAGEIPRPVAGPDGINSLDRLWELLLRAAVLWYAGFALWTV 276
           ++ +    A  IP+P + P  +     L  L  R  +L  A  +L T+
Sbjct: 234 IVTETATEAESIPQPSSAPVCLQPTLVLLGLSKRNFILLLAAVSLLTI 281