Pairwise Alignments

Query, 278 a.a., AmpE protein from Pseudomonas fluorescens FW300-N2E2

Subject, 283 a.a., regulatory protein AmpE (RefSeq) from Shewanella loihica PV-4

 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 20/287 (6%)

Query: 1   MSFLVLLLAVWIEKFSALRQRVQRDGGWLHELNKLEASPRWVNRPW---LVLTVMVLLPV 57
           M+   LLLA+ IE+   L Q  Q     L  L  L A   +  +     L++ + ++LP 
Sbjct: 1   MALFSLLLAIMIERLKLLPQAWQ-----LETLLALYAKSFFGRKQLTNDLMMAIALILPA 55

Query: 58  ALLALLLWVLEPVAYGLLALPVHLLVVIYSLGRGDLLAGLGPFRDAWRREDLQAAAHVAK 117
             + +L W +  + +GLL+L + + V I              +  A  R D QA  H A 
Sbjct: 56  IAVQVLAWFVAGMFWGLLSLGLWVGVSILCFSHLKQRQVFKQYIQAACRGDAQACYHFAD 115

Query: 118 RDLD----IEANDGEQLLERVQGHLLWQAYQSFFAVIFWYFVLGPVAALSYRLLALAAEH 173
            +LD    + A   + L E+V   + W  Y+ + AV  +    GP  A+ Y  +   ++ 
Sbjct: 116 -ELDPYVSLNAVSEQDLGEKVGQTVAWLNYRFYGAVALYLIFFGPAGAVLYCTVRYFSDD 174

Query: 174 SQNPG----VAERAAQMRHAFDWVPVRLLAASFALVGNFVAVSRVMLHELLNWNISAADL 229
           +++ G    + + A  +    DW+P RL+A  + L G+F         + L W   A D+
Sbjct: 175 AKSRGADLPLVDTALML---LDWLPSRLIALGYVLSGHFSLAFSRWRQQALCWRCPARDV 231

Query: 230 IDKVGLVAGEIPRPVAGPDGINSLDRLWELLLRAAVLWYAGFALWTV 276
           I +V L A  +      P  + S   L +L  R  +L   G +L T+
Sbjct: 232 ISEVALAAETVEFNSPTPICVQSTISLLQLSKRNFILLVIGLSLLTI 278