Pairwise Alignments

Query, 258 a.a., Putative deoxyribonuclease YjjV from Pseudomonas fluorescens FW300-N2E2

Subject, 255 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

 Score =  154 bits (388), Expect = 2e-42
 Identities = 90/257 (35%), Positives = 147/257 (57%), Gaps = 7/257 (2%)

Query: 3   LIDTHTHLDFPDFDADRPALLAESRALGVRQMVVLGVYRDNWQRVWDLVQSDPDL-HAAL 61
           +IDTH H+   +FD DR  ++A +R +G+ ++++  +  ++   +    ++ PDL H+ +
Sbjct: 1   MIDTHAHVYASEFDHDRDEVIARARQVGIEKILMPNIDLNSIAPMLATEKAYPDLCHSMM 60

Query: 62  GLHPVYLDQHRPDDVALLREWLSRLAGHRQLCAVGEIGLDYYIETLDRERQQTLFEAQLQ 121
           GLHP Y+D +    +A + EW SR        AVGEIG+D Y +   +  Q+  F  QL 
Sbjct: 61  GLHPCYVDANVKQTLATIYEWFSR----HTFIAVGEIGIDLYWDKTFKAEQEMAFLTQLN 116

Query: 122 LAAEFELPALIHVRRSHAAVIATLKRFGLKRT-GIIHAFAGSLEEAREYIKLGFKLGLGG 180
            A E +LP +IH R S    +A LK+    R  G+ H F GS++EA+    LGF LG+GG
Sbjct: 117 WAKELDLPVVIHTRDSLNETLALLKQAQDGRLRGVFHCFGGSVDEAKAINDLGFHLGIGG 176

Query: 181 AATWPQALRMHRVLAKLPLDAVVLETDSPDMAPAMFPGQRNSPAHLPAICEALAQIMTVR 240
            +T+  +  M +V+ +L L+ V+LETD P +AP    G+RN P     I E +AQ+ ++ 
Sbjct: 177 VSTFKNS-GMDQVIPQLDLNYVILETDCPYLAPVPHRGKRNEPMLTHLISEKVAQLRSLP 235

Query: 241 PEQLAEASTTNARDLFG 257
             ++ + +  N++ LFG
Sbjct: 236 LGEVIKITNNNSKALFG 252