Pairwise Alignments

Query, 341 a.a., ABC transporter, ATP-binding protein from Pseudomonas fluorescens FW300-N2E2

Subject, 905 a.a., ribosome-associated ATPase/putative transporter RbbA from Pseudomonas fluorescens SBW25-INTG

 Score =  125 bits (314), Expect = 4e-33
 Identities = 69/210 (32%), Positives = 120/210 (57%), Gaps = 2/210 (0%)

Query: 38  TAVDDISFTVKQGEVVGFLGPNGAGKTTTLKMLSGLLYPTVGQISVLGHKPQLRSKEFLK 97
           TAV+++S  + +GE+ GFLG NG GKTTT+K+L+GL+  T G  ++LG+    +     K
Sbjct: 282 TAVNNVSLAIGRGEIFGFLGSNGCGKTTTMKVLTGLMPATEGSATLLGNPVNAKDLATRK 341

Query: 98  SISLIMGQRQQLIWDLPAMETFRLNQKIFEIPDAQFKKTYGYLDELLQVSKLAKAPVRTL 157
            +   M Q   L  +L   +   L+ ++F++P A        L +   +  +A+ P   L
Sbjct: 342 RVGF-MSQSFSLYGELSVRQNLVLHAQLFDLPTADSGPRIDELIQRFDLIDVAEQPSGEL 400

Query: 158 SLGEKMKCELVASLLHDPKVLFLDEPTIGLDVGVQKIVRSFIRDYSRERNVSVLLTSHYM 217
            LG + +  L  ++LH P+VL LDEPT G+D   +      + + SRE+ V++ L++H+M
Sbjct: 401 PLGLRQRLSLAVAVLHRPEVLILDEPTSGVDPAARDDFWRLLIELSREQGVTIFLSTHFM 460

Query: 218 QDIEALCERVVVVSDGKISFDDTLESLRKR 247
            + +  C+R+ ++  GK+   DT E+LR++
Sbjct: 461 NEAQR-CDRISLMHAGKVLACDTPEALRRQ 489



 Score = 80.9 bits (198), Expect = 1e-19
 Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 5/228 (2%)

Query: 30  VSPKTSEKTAVDDISFTVKQGEVVGFLGPNGAGKTTTLKMLSGLLYPTVGQISVLG---H 86
           ++ +  ++ A+ DI+F++  G   G +GP+GAGK++ L +++G+     GQ+ VLG    
Sbjct: 11  INHRYGKQQALVDITFSLPAGTRCGLIGPDGAGKSSLLGLIAGVKKLQDGQLHVLGGAIE 70

Query: 87  KPQLRSKEFLKSISLIMGQRQQLIWDLPAMETFRLNQKIFEIPDAQFKKTYGYLDELLQV 146
             + R+  + +   +  G    L  +L   E  R    +F +  A   +    L     +
Sbjct: 71  DRRHRNSLYPRIAFMPQGLGGNLYPELSIRENIRFFATLFGLSKADCDQRMHNLLLATDL 130

Query: 147 SKLAKAPVRTLSLGEKMKCELVASLLHDPKVLFLDEPTIGLDVGVQKIVRSFIRDYSRER 206
           ++ A  P   LS G K K  L  +L+HDP +L LDEPT G+D   ++     +     ER
Sbjct: 131 ARFADRPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRRRFWELVDSVRSER 190

Query: 207 -NVSVLLTSHYMQDIEALCERVVVVSDGKISFDDTLESLRKRMSDHRI 253
             +++L+ + YM++ E   E  +++  GK+  D     L    S  ++
Sbjct: 191 PQLTLLVATAYMEEAEQF-EHCLMLDRGKLIADGLSSELAGATSSGKL 237