Pairwise Alignments

Query, 333 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Pseudomonas fluorescens FW300-N2E2

Subject, 299 a.a., diaminopimelate epimerase from Burkholderia phytofirmans PsJN

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 65/237 (27%), Positives = 87/237 (36%), Gaps = 42/237 (17%)

Query: 80  FDLLIVNTDGTLAERSGNGLTIFSQALQEQGLMAGTGDCLLQVHHDKPDGLSPLQTSVRA 139
           F   I N DG   E  GNG   F + +++ GL   T    ++V   K      +Q +   
Sbjct: 60  FRYRIFNCDGGEVEHCGNGARCFVKFVRDSGL---TDQRSVRVQVQKGTITLTMQENGEV 116

Query: 140 AEFEGAQGFWLDLGKPLFGPGAVGAQDVVRVMFNQCDVS-RVAALERLNPAWGNS----- 193
                     +D+G P+F P         RV F    +  R    + L P   N      
Sbjct: 117 L---------VDMGTPVFDPE--------RVPFATKGLQGRGEGADTLWPLDVNGTTRWI 159

Query: 194 QFVNIGNPHCVTLVDSAEALPSNPQMRAPALCQSLTRIAYAPPGGAGMPCPMGVNLQWAW 253
             V++GNPH V +VD  EA P                +   P        P  VN  +  
Sbjct: 160 SVVSMGNPHAVQVVDDVEAFPV---------------LVEGPVIERHARFPQRVNAGFMQ 204

Query: 254 LEAEGRIAARVFERGEGPTASSGTSASAVACAAWRAGWVQAGPVSVMMPGGLRRFCW 310
           +     I  RV+ERG G T + GT A A   A  R G + A PV V   GG     W
Sbjct: 205 IVGRSEIKLRVYERGAGETLACGTGACAAVAAGIRRGLLDA-PVLVHTHGGKLTITW 260