Pairwise Alignments

Query, 712 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

Subject, 705 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  321 bits (823), Expect = 7e-92
 Identities = 223/723 (30%), Positives = 368/723 (50%), Gaps = 31/723 (4%)

Query: 1   MKFRSIQFSVAALAGAIVLSVVGALVLYSLF-----AGARTQEMVQQRTKAQFEQLIEQR 55
           MK  SI   +  +  A+ L +V A++ +SL+       A+    VQ     +  Q +  R
Sbjct: 1   MKHLSISTKLLWITSALFLIIV-AILSFSLWWSLSDKNAQLAGQVQGALHDETRQRLSAR 59

Query: 56  LTALARTQASLIQRELEAPLLLARGLATSNALMGMNGTDGNPQLKVPREQMISLLRETVV 115
                   A  I      P   A  +  S A   ++           RE +   +   + 
Sbjct: 60  AGEYGERVAGFINEAYRIPFSFAGMIEQSAASQPLS-----------REGVEESVAGVLR 108

Query: 116 RNPKILGAYIAWEPNAIDHDDANYVNRQVVGMETNGRFLPWWFRNQDGSLGLEKLADVT- 174
           +N ++   Y  +EPN  D  D +Y  +    +   G    ++ R+ DGS+  +++ D + 
Sbjct: 109 KNSQLSSMYAQFEPNGYDGRDGDYTQKISHSVPEVGTLEIYYTRSDDGSVEHQQVDDASE 168

Query: 175 --DQKLLSTGIRASEYYLCSQDSKKACVIDPAPYRVGSTMT-MLASFIEPIMIDGQFQGI 231
             D  L   G+R +E+YLC++D+K+ C+++P  Y +    T ++ S   P+++ G F+G+
Sbjct: 169 KYDATLKEFGVREAEWYLCAKDTKQPCLMEPYLYEISPGNTALMTSLTVPVVVGGSFRGV 228

Query: 232 VGADLSVNFIQDMLVAADGKLYDGAGEMALLSSNNRLVA---FTKDPSKLGEKASDLLDA 288
           +G D+++   Q ++      LY G  ++ LLS    +VA   + K    LGE  +  L A
Sbjct: 229 IGVDVNLPVFQKLIDELSASLYQGKAKVTLLSQKGLVVAASHYDKKARPLGESIAPSL-A 287

Query: 289 SALDNLAKLGDGEVRYDIDEAHGHIEVYMPFGIGETNARWTLMLQLPLNAVMADLQALQK 348
           S L  L + G    + D      +I V  P  I    A+W+L++++          A+ K
Sbjct: 288 SQLTGLHRQGGYLEQGD------NIIVAYPIEIPLAKAQWSLVIEVAKADAYQAANAMDK 341

Query: 349 DLDHQRQADIFGMAIVGLVIAGIGLLVIWLVGHGIARPLKQMVAMLDDIAQGEGDLTRRL 408
            +     +    + IVG++++ I ++ I LV   I  PLK + + ++++A  EGDLT+++
Sbjct: 342 AMSAMASSLGSLLLIVGVIVSLIAVVTISLVIRSIVAPLKVIQSRVENLASAEGDLTQQV 401

Query: 409 VSDRADELGAIARGFNTFLSKLQGMITQVVTSVQSVSDSSEHTADIAIRTNQGVHKQMSE 468
             +   EL A+  G N F++KL+ +I ++          S+  A+IA +T+  V++Q S+
Sbjct: 402 TVESHAELIALGGGINGFINKLRLLIGELKELASRSQAESQVAAEIAQQTHNSVNRQYSD 461

Query: 469 IDQVATAVHEMTATAQDVARNATQAAQAASHADQAASQGMQIVRDTSTSIGALAVEIGKA 528
           I+ V TAV+EM+ATA +VA+ + Q A            G   +      +  ++ E   A
Sbjct: 462 IESVVTAVNEMSATALEVAKASEQTASETEAMTLNVKAGEDSLSQAMGYVTHMSQESLLA 521

Query: 529 VGVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLA 588
              V  +A+ S NI+ IL  I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA
Sbjct: 522 KEAVGKVAESSTNISKILEVISAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALA 581

Query: 589 QKTQQATEEIQTMIQQLQQGTRDVVRVMEDSQTRTDESVQHAAKAAQALETITQAVSVIN 648
            KTQ +T+EI  +I+ LQ+      ++++        +V     A  +L TI   +  ++
Sbjct: 582 SKTQSSTDEIGKLIEALQREVNSASQIIDQGVDGAQRAVAQTESALSSLNTIVNQIQEVS 641

Query: 649 DMNTQIASAAEEQSAVADDINRNVINIGQVANEVASGADESSAASAGLTKLAEQQRRLIN 708
              T IA+AAEEQSAV ++++RN+  I   A+E+A  ADE+  +SA L  L EQQ + + 
Sbjct: 642 SQVTHIATAAEEQSAVTEEVSRNITGISDSASELARLADEAQQSSASLAGLVEQQHQQLG 701

Query: 709 QFR 711
           + +
Sbjct: 702 KLK 704