Pairwise Alignments

Query, 332 a.a., Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) from Pseudomonas fluorescens FW300-N2E2

Subject, 401 a.a., rRNA (guanine-N(2)-)-methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 79/288 (27%), Positives = 116/288 (40%), Gaps = 35/288 (12%)

Query: 63  VPERGFDTAVVFLPKAKDLTDYILNAVAARLAGREVYLVGEKRSGIEGA-----SKQLNP 117
           +P +G +  ++ LPK  +   + L  ++  LA      +G K   I  A     +K L P
Sbjct: 107 LPPQGINLVLMKLPKNLNYFIHQLQRLSQSLAPNTPVYIGAKAKSINKALLETIAKHLGP 166

Query: 118 FGKPRKLDSARHCQLWQVTVANAPEATPLESLAQTYELPLAEGPLKVISLPGVFSHGRLD 177
                     R   +        P A P E         + E  L + +L  VF+  +LD
Sbjct: 167 ASASLAWKKTR---VITCIADGKPRALPSE-----VSWAVKEFNLSISNLSNVFAANKLD 218

Query: 178 RGSALLLEHLDKLPSGH---LLDFGCGAGVLGAAVKRRYPHNTVTLLDVDAFAAASSRLT 234
            G+ ++L   D LP GH   ++D GCG G+LG   K+ YP+  V  +D    A  S+R  
Sbjct: 219 IGARIML---DNLPEGHFDTIVDLGCGNGILGLRAKQCYPNAEVHFVDDSEMAITSARQN 275

Query: 235 LAANGLE-------------AEVLTGDGIDAAPMGLSAILSNPPFHVGVHTDYHATENLL 281
             AN L+              + LT  G +  P     +L NPPFH G     H    + 
Sbjct: 276 WQANKLDNPEQAKPQGHFHWDDCLTHLGDEVKP---DLVLCNPPFHQGEAITDHIAWQMF 332

Query: 282 RKAAKHLKNGGELRLVANSFLKYQPLIEEHLGVCAIKAEGQGFRIYRA 329
             A   L+ GG L++V N  L Y   ++     C   A    F I RA
Sbjct: 333 LDAFHQLRPGGMLQVVGNRHLGYHVKLKRIFKNCETAASNGKFVILRA 380