Pairwise Alignments

Query, 634 a.a., FIG00963364: hypothetical protein from Pseudomonas fluorescens FW300-N2E2

Subject, 626 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  529 bits (1362), Expect = e-154
 Identities = 304/632 (48%), Positives = 390/632 (61%), Gaps = 25/632 (3%)

Query: 11  LPAVLVGPLLRRLEPTRLVMWLVGTRALAMTLRVAGVGD--LALDATRCTVVPVGQRAFV 68
           LP +L GP+LR  +     + LV +  L+      G     LA DA  C  + +G  AF 
Sbjct: 3   LPLLLTGPMLRHCDVDHFTLTLVTSEPLSQLTLTLGETQHLLADDAIEC--LELGTHAFF 60

Query: 69  HLIDVRLANPLPRDVTIDYDLLVDG-APIAEWAPHLLYDGAQCPNFILHSRIEQLVHGSC 127
           +LI +        D  I Y L       +      L Y   Q PN ++   I+ L+HGSC
Sbjct: 61  YLIYLSKPGLNSLDTCIPYGLSDSHHGDLLTPLTQLTYGDNQTPNLVIKPEIDTLLHGSC 120

Query: 128 RKPHYPANDGLLCVDRLLAQAPE--QRPALLMMSGDQVYADDVAGPMLRAIHALIECLGL 185
           R  H+ ++D ++  D LL   P+  +RPAL+M+SGDQ+Y DDVAGPML AI  +IE LGL
Sbjct: 121 RNAHHHSSDAMVAADTLLENGPDVAERPALMMLSGDQIYVDDVAGPMLYAIGRVIEILGL 180

Query: 186 FEECLEGAVVEDSARLYQHPASYYHR-ADLLPALE--SNETLRERFFGGARKPIFTSSSA 242
           +EE  + A +  S ++  HPA+ Y R   LLP  E  +   L   +      PIFTSS A
Sbjct: 181 YEEEFQQAPLTHSKQISYHPAAMYQRHKKLLPRTEYPAGSALVRWYIN---HPIFTSSIA 237

Query: 243 DNHLVTFAEVMAMYLLVWSPVPWTLITVQPPELT---VERRQRYDLEQQRIDAFKTGLGG 299
           +NHLV+ AE++A+YLL WSP  W LI + P E+T      +QR+  E   +  FK GL  
Sbjct: 238 ENHLVSLAEIVALYLLTWSPELWQLIDI-PKEVTGLSPANQQRWQREWIHLLEFKAGLTK 296

Query: 300 VARVFAHLSCLMIFDDHDITDDWNLSAQWEETAYGHPFSKRIIGNALIAYMLCQGWGNNP 359
           V R+ AHL   MIFDDHDITDDWNL+A+WE+ AYGH FSKRIIGNALI Y++ QG GN  
Sbjct: 297 VRRLLAHLPTYMIFDDHDITDDWNLTAKWEQAAYGHAFSKRIIGNALIGYLVFQGLGNQK 356

Query: 360 DAF-ADVLPQTLALSDTARDRYLDSEPQDQLIDTLLGFQQWHYVLPSTPALVVLDTRTRR 418
           D F A +LPQ   L      R  +    D+LID LLGF QWHY L ++P LVVLDTRT+R
Sbjct: 357 DKFSAAILPQ---LKQFLAGR--EEAQHDELIDALLGFDQWHYSLNTSPKLVVLDTRTQR 411

Query: 419 WRSENNLKQPSGLLDWEALSELQQELLDHPSAIIVSPAPIFGVKLIETVQRVFSWCGYPL 478
           WRSE+NL +PSGL+DWEAL E QQ+L+     IIVS AP+FGVKLIE VQR  ++ G  L
Sbjct: 412 WRSESNLAKPSGLMDWEALMEFQQQLVGQEKVIIVSAAPMFGVKLIEAVQRAATFIGASL 471

Query: 479 LVDAENWMAHRGAAQVILNIFRHSRTPGNYVVLSGDVHYCFVYEVLIPHRKGGPRIWQIT 538
           LVDAENWMAH G A  +L+IF H +TP  +V+LSGDVHY F Y++ I  R  GP+I+QIT
Sbjct: 472 LVDAENWMAHPGTANTLLSIFLHRKTPQQFVILSGDVHYSFAYDIGIRFRTQGPQIYQIT 531

Query: 539 SSGIKNEFPPALLEWFDRLNRWLYSPRSPLNWFTKRRSMRIVPHTPEHAEAGERLWNSAG 598
           SSGIKN+FP  LL  FD+ N WLY   SPLNWFTKR+ M I    P +    +RL N++G
Sbjct: 532 SSGIKNQFPEKLLPVFDKFNGWLYGHFSPLNWFTKRKRMSIRGRRP-NGMRSQRLINASG 590

Query: 599 IGQVFFNEQGQPAQIYQHNANGQPPTRMLPPK 630
           IG V F + G P++I   + +    T  LPP+
Sbjct: 591 IGLVSFAKDGAPSKIAVLHGD-MSTTEFLPPR 621