Pairwise Alignments

Query, 675 a.a., TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

Subject, 674 a.a., alpha-ketoglutarate TRAP transporter, 4TM/12TM components (from data) from Pseudomonas stutzeri RCH2

 Score = 1094 bits (2830), Expect = 0.0
 Identities = 542/675 (80%), Positives = 603/675 (89%), Gaps = 1/675 (0%)

Query: 1   MSEDQHGIATDPRDWPKTLFYVALLFSIFQIVTAAFSPVSSIVLRAVHVGFLLWVVFLSY 60
           MSE Q G+   P +WP+ LFYVALLFSI+QIVTAAF PVSS VLRA HVGFLL +VFL Y
Sbjct: 1   MSESQ-GLHASPSEWPRALFYVALLFSIYQIVTAAFHPVSSQVLRAGHVGFLLLLVFLCY 59

Query: 61  PAHGRQRPWQPLAWVLSLGGVATALYQWVFESDLIQRSGDLTTTDMIMGIVLVVLVFEAA 120
           PA G  +P+QP+AW+L L G AT  YQW FE+DLIQRSGD+TT DM++G+ L+VLVFEAA
Sbjct: 60  PARGNGKPFQPVAWLLGLAGFATFFYQWYFEADLIQRSGDMTTADMVVGLTLIVLVFEAA 119

Query: 121 RRVMGIALPIICGLFLAYGLFGEYLPGDLAHRGYGLDQIINQLSFGTEGLYGTPTYVSAT 180
           RRVMGIALPIIC LFLAYGL GEYLPGDLAHRGY LDQI+NQLSFGTEGLYGTPTYVSAT
Sbjct: 120 RRVMGIALPIICALFLAYGLLGEYLPGDLAHRGYYLDQIVNQLSFGTEGLYGTPTYVSAT 179

Query: 181 YIFLFILFGAFLEKAGMIKLFTDFAMGLFGHKLGGPAKVAVVSSALMGTITGSGIANVVT 240
           YIFLFILFG+FLE+AGMIKLFTDFAMGLFGHKLGGPAKV+VVSSALMGTITGSG+ANVVT
Sbjct: 180 YIFLFILFGSFLEQAGMIKLFTDFAMGLFGHKLGGPAKVSVVSSALMGTITGSGVANVVT 239

Query: 241 TGQFTIPLMKRFGYKAAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAAL 300
           TGQFTIPLMKRFGY+ AFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAAL
Sbjct: 240 TGQFTIPLMKRFGYRPAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAAL 299

Query: 301 IPACLYFGSVFWMVHLEAKRSDLKGLPKDQCPSAWGAVKDSWFLLIPLGVLVYLLFSGRT 360
           IPA LYFGSVFWMVHLEAKR+ LKGLPKD+CPSA  AVK+ W+LLIPL VLV+LLFSGRT
Sbjct: 300 IPALLYFGSVFWMVHLEAKRAGLKGLPKDECPSAMAAVKERWYLLIPLVVLVWLLFSGRT 359

Query: 361 PLFSGMVGLALTAIVILGSAIILKVSNYALRCAFWIALGLLCVGFFRLGIGVVFAVIGVL 420
           P+F+G +GLALTAIVILGSAIILKVSN+ALR AFWIALGLLC GFF+LGIGV+F VI  L
Sbjct: 360 PMFAGTIGLALTAIVILGSAIILKVSNFALRIAFWIALGLLCAGFFQLGIGVIFGVIAAL 419

Query: 421 VVACWFMQGTRETLVICLHALVDGARHAVPVGIACALVGSIIAVVSLTGVASTFAGYILA 480
           V  CWF++G R+TLVICLHALV+GARHAVPVGIACALVG II VVSLTGVASTFAGYILA
Sbjct: 420 VAVCWFIKGGRDTLVICLHALVEGARHAVPVGIACALVGVIIGVVSLTGVASTFAGYILA 479

Query: 481 IGRDNLLLSLILTMLTCLVLGMGIPTIPNYIITSSIAAPALLELGVPLIVSHMFVFYFGI 540
           +G +NL LSL+LTMLTCLVLGMGIPTIPNYIITSSIAAPALL+LGVPLIVSHMFVFYFGI
Sbjct: 480 VGENNLFLSLLLTMLTCLVLGMGIPTIPNYIITSSIAAPALLDLGVPLIVSHMFVFYFGI 539

Query: 541 LADLTPPVALACFAAAPIARESGLKISFWAVRIALAGFVIPFMTVYNPALMLQGDNLWMT 600
           +ADLTPPVALACFAAAPIA+E GLKIS WA+RIA+AGF++PFM VYNPALM+QG +   T
Sbjct: 540 MADLTPPVALACFAAAPIAKERGLKISMWAIRIAIAGFIVPFMAVYNPALMMQGGDWGAT 599

Query: 601 AYMLIKTLLAVGLWGMASTGYLQQKMPIWERLLCFAAGALLVVALPVTDEIGFVLGGLLI 660
            YML K   AVGLWG   TGYLQ+ M +WE++L FAA A +V+A+P++DEIGF LG L +
Sbjct: 600 LYMLFKAAFAVGLWGAVFTGYLQRPMALWEKVLAFAAAASMVLAMPISDEIGFALGALFL 659

Query: 661 LQHVWRARRSGRALA 675
           +QH+WRARR+  A A
Sbjct: 660 IQHIWRARRAEPATA 674