Pairwise Alignments

Query, 675 a.a., TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

Subject, 597 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 77.0 bits (188), Expect = 2e-18
 Identities = 101/431 (23%), Positives = 166/431 (38%), Gaps = 65/431 (15%)

Query: 168 EGLYGTPTYVSATYIFLFILFGAFLEKAGMIKLFTDFAMGLFGHKLGGPAKVAVVSSALM 227
           E  +G  +  +   I  F   G  LE++GM +   D    LFG   GG A   +   AL+
Sbjct: 64  ERFWGVMSNDTLLAIPFFTFMGIVLERSGMAEDLLDTIGQLFGPVRGGLAYAVIFVGALL 123

Query: 228 GTITGSGIANVVTTGQFTIPLMKRFGYKAAFAGGVEATSSMGSQIMPPVMGAVAFIMAET 287
              TG   A+V+  G  ++P+M R+GY    A GV A S   +QI+PP +  V  ++A+ 
Sbjct: 124 AATTGVVAASVIAMGLISLPIMLRYGYDRRIASGVIAASGTLAQIIPPSL--VLIVLADQ 181

Query: 288 INVPFVEIAKAALIPAC----LYFGSVFWMVHLEAKRSDLKGLPKDQCPSAWGAVKDSWF 343
           +     ++   ALIP      LY G +  M  +  KR  +  LP +      G    +  
Sbjct: 182 LGRSVGDMYAGALIPGLVLTGLYMGYILLMTFV--KRHSMPALPLEARTLGSGVASLAIA 239

Query: 344 LLIP---------------------LGVLVYLLF------SGRTPLFSGMVGLALTAIVI 376
           LL+                      LG  V ++F      + RT   + +  LA   I++
Sbjct: 240 LLVACAIAYAAHVYLSPTQGENADILGATVGIIFIYLAALADRTLKINALSRLAQQVIIV 299

Query: 377 LGSAIILKVSNYALRCAFWIALGLLCVGFFRLGIGVVFAVIGVLVVACWFMQGTRETLVI 436
           L   + L           ++ LG + +G      G     +G LV+A       R  + +
Sbjct: 300 LIPPLAL----------IFLVLGTIFLGIATPTEGGAMGAVGALVMAA---GKGRLNMEV 346

Query: 437 CLHALVDGARHAVPVGIACALVGSIIAVVSLTGV-ASTFAGYILAIGRDNLLLSLILTML 495
              AL    R  +   +   L+G+ +  ++  GV    +  ++L       +  LI   +
Sbjct: 347 VRAALASTTR--LSAFVLFILIGARVFSLTFYGVNGHLWVEHLLTALPGGEIGFLIAVNV 404

Query: 496 TCLVLGMGIPTIPNYIITSSIAAPALLELGVPLIVSHMFVFYFGILADLT-------PPV 548
               L   +       I   + APA  +LG+ LI       +FG+L  +        PP 
Sbjct: 405 LVFFLAFFLDFFELAFIIVPLLAPAADKLGIDLI-------WFGVLLGINMQTSFMHPPF 457

Query: 549 ALACFAAAPIA 559
             A F    +A
Sbjct: 458 GFALFYLRSVA 468