Pairwise Alignments

Query, 675 a.a., TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

Subject, 622 a.a., transmembrane protein from Sinorhizobium meliloti 1021

 Score = 60.5 bits (145), Expect = 2e-13
 Identities = 81/382 (21%), Positives = 147/382 (38%), Gaps = 57/382 (14%)

Query: 184 LFILFGAFLEKAGMIKLFTDFAMGLFGHKLGGPAKVAVVSSALMGTITGSGIANVVTTGQ 243
           +F+L G  L+  GM K   DF   + GH   G + V + S  L+  I+GS ++++ T   
Sbjct: 262 VFVLLGCILDATGMGKAIVDFLASMLGHVKAGMSYVLLGSLFLVSGISGSKVSDMATVAP 321

Query: 244 FTIPLMKRFGYKAAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPA 303
              P MKR G+K      + AT +  +  +PP    V  ++     V    +  +    A
Sbjct: 322 ALFPEMKRRGHKPKEMIALLATGAAMADTVPP--SIVLIVLGSVAGVSIAALFTSGFAIA 379

Query: 304 CLYFGSVFWMVHLEAKRSDLKGLPKDQCPSAWGAVKDSWFLLIPLGVLVYLLFSGRTPLF 363
            +   ++  +  ++A R ++ G+ +       G       +  P  VL +++ S      
Sbjct: 380 LVLLVALAALARIKAARENVDGVVRPSLKRIGGTA----LIAAPALVLPFIIRSA----- 430

Query: 364 SGMVGLALTAIVILGSAIILKVSNYALRCAFWIALGLLCVGFFRLGIGVVFAVIGVLVVA 423
                      V  G+A   +VS  A+  AF                     +IG ++  
Sbjct: 431 -----------VASGAATATEVSTIAVVYAF---------------------IIGTVLYG 458

Query: 424 CWFMQGTRETLVICLHALVDGARHAVPVGIACALVGSIIA---VVSLTGVASTFAGYILA 480
              M+ T   LV    A + GA   + +G A A+  ++        LT + S   G    
Sbjct: 459 GIGMRRTYRMLVET--AAMSGAILLI-LGTAAAMAWALTQTGFAFELTDMMSGLPGGWFT 515

Query: 481 IGRDNLLLSLILTMLTCLVLGMGIPTIPNYIITSSIAAPALLELGVPLIVSHMFVFYFGI 540
                +L+S+ L ML    LG  +  +P  ++ + I  P    +G+  +   M +     
Sbjct: 516 F----MLVSIALFML----LGCVLEGLPAIVLLAPIMFPIARAMGIHDVHYSMVIVTAMN 567

Query: 541 LADLTPPVALACFAAAPIARES 562
           +  + PP+ +  + A  I   S
Sbjct: 568 VGLMAPPIGIGFYIACKIGNVS 589