Pairwise Alignments

Query, 675 a.a., TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

Subject, 468 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 80.9 bits (198), Expect = 1e-19
 Identities = 102/413 (24%), Positives = 171/413 (41%), Gaps = 19/413 (4%)

Query: 185 FILFGAFLEKAGMIKLFTDFAMGLFGHKLGGPAKVAVVSSALMGTITGSGIANVVTTGQF 244
           FIL G  +  AG+      FA+ L G   GG A+V +V S +   ++G+ +A+    G  
Sbjct: 60  FILAGNLMNSAGVTGRIYSFAVALVGWMKGGLAQVNIVGSVIFSGMSGTALADAAGIGTI 119

Query: 245 TIPLMKRFGYKAAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPAC 304
            I  MK  GY    A GV A S+    I PP +  V + M    NV    +  A ++P  
Sbjct: 120 EIKAMKDHGYPVDAAVGVTAASATLGPIFPPSLPFVIYGM--MANVSIGALFMAGVVPGV 177

Query: 305 LYFGSVFWMVHLEA-KRSDLKGLPKDQCPSAWGAVKDSWFLLIPLGVLVYLLFSGRTPLF 363
           +    +   V + A KR      P +       +++    L +PL   +YLL +    + 
Sbjct: 178 VMTVLMMLTVAIFAYKRGWGSDTPFEMKRLLAASLEVVVVLAVPL--FIYLLMAAGLSM- 234

Query: 364 SGMVGLALTAIVILGSAIILKVSNYALRCAFWIALGLLCVGFFRLGIGVVFAVIGVLVVA 423
           +  VG+AL  +V+L        S         I +G + +G+F      V AVI  L + 
Sbjct: 235 NLAVGIAL--VVLLALDWYFDFSAVMALMTPIILIGGMTMGWFTPTEAAVAAVIWSLFLG 292

Query: 424 CWFMQGTRETLVICLHALVDGARHAVPVGIACALVGSIIAVVSLTGVASTFAGYILAIGR 483
              ++    T+     A  D       V            +++++  A   +G IL I  
Sbjct: 293 --LVRYRTMTMSTLARATFDTIETTASVLFIVTAASIFAWLLTVSQAAQMLSGAILTI-T 349

Query: 484 DNLLLSLILTMLTCLVLGMGIPTIPNYIITSSIAAPALLELGVPLIVSHMFVFYFGILAD 543
           DN  + LIL  L  L +G  + TI    I   I  P   + G+  +   + +    ++  
Sbjct: 350 DNKWVFLILVNLLMLFVGCFLDTIAAITILVPILLPLTAQFGIDPVHFGLIMTLNLMIGL 409

Query: 544 LTPPVALACFAAAPIAR----ESGLKISFWAVRIALAGFVIPFMTVYNPALML 592
           L PP+ +  F  + +A+     + + I  W V + +A  +I F+    PA++L
Sbjct: 410 LHPPLGMVLFVLSRVAKLSVERTTMAILPWLVPLFIALILITFV----PAVVL 458