Pairwise Alignments

Query, 675 a.a., TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

Subject, 425 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 88.2 bits (217), Expect = 7e-22
 Identities = 106/425 (24%), Positives = 174/425 (40%), Gaps = 73/425 (17%)

Query: 184 LFILFGAFLEKAGMIKLFTDFAMGLFGHKLGGPAKVAVVSSALMGTITGSGIANVVTTGQ 243
           LFI  G  +  +G+      FA  L G   GG A+V V  S +   ++G+ +A++   G+
Sbjct: 59  LFIFVGNLMNLSGITDRIFRFAYTLVGRMPGGLAQVNVFGSLIFSGMSGAALADIGGLGR 118

Query: 244 FTIPLMKRFGYKAAFAGGVEATSSMGSQIMPPVMGAVAFIMAETINVPFVEIAKAALIPA 303
             I  MK+ G+  +FAG V A S+    I PP +  + +      +V  V++  A ++PA
Sbjct: 119 IEIDAMKKRGFDPSFAGAVTAASATLGPIFPPSIPLIVY--GSVTSVSIVQLLVAGIMPA 176

Query: 304 CLYFGSVFWMVHLEAKRSDLKGLPKDQCPSAWGAVKDSWFLLIPLGVLVYLLFSG----- 358
            L                         C +           L+ L VL+  +  G     
Sbjct: 177 VL-------------------------CTA-----------LLMLTVLIVAIRHGHARAE 200

Query: 359 RTPLFSGMVGLALTAI-VILGSAIILKVSNYALRCAFWIALGLLCVGFFRLGIGVVFAVI 417
           R P    +VG  + A+  IL  A+++               G+    F       + AV 
Sbjct: 201 RWPTAGELVGTLVPALPAILAPALMVG--------------GMTAGAFTPTEAAAITAVY 246

Query: 418 GVLVVACWFMQGTRETLVICLHALVDGARHAVPVGI---ACALVGSIIAVVSLTGVASTF 474
            + +    + + T   L    H+ V  AR +  + I   + AL G I+AV     V  TF
Sbjct: 247 VIFISGVLYRELTPAHL---WHSAVLTARSSSAILIIVASAALFGWILAVEQ---VPQTF 300

Query: 475 AGYILAIGRDNLLLSLILTMLTCLVLGMGIPTIPNYIITSSIAAPALLELGVPLIVSHMF 534
           A  +L   +D L+L LI+  L   V GM + +    ++   I AP L+  GV  +   + 
Sbjct: 301 AAALLGWSKDPLML-LIIANLIFFVAGMFLDSTTATLLLVPIIAPPLVMAGVDPVQLGIV 359

Query: 535 VFYFGILADLTPPVALACFAAAPIARESGLKISFWAVRIALAGFVIPFMTVYNPALMLQG 594
             +  +L  LTPP+ L+ F  + IA     K+S   +  AL  F IP ++      + + 
Sbjct: 360 TIFNLMLGLLTPPMGLSLFLVSDIA-----KVSIRQLLRALVPFYIPLVSTLVILTLAKD 414

Query: 595 DNLWM 599
             LW+
Sbjct: 415 FTLWL 419