Pairwise Alignments

Query, 675 a.a., TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 from Pseudomonas fluorescens FW300-N2E2

Subject, 429 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score = 79.3 bits (194), Expect = 3e-19
 Identities = 104/372 (27%), Positives = 163/372 (43%), Gaps = 36/372 (9%)

Query: 165 FGTEGLYGTPTYVS---ATYIFL----FILFGAFLEKAGMIKLFTDFAMGLFGHKLGGPA 217
           FG  GL   PT V    A Y  L    F+L G   E++G+      FA+ L G + GG A
Sbjct: 33  FGDLGLMSLPTSVYTGIAKYPLLAIPVFVLAGMIFERSGVALRLVRFAVALVGQRRGGLA 92

Query: 218 KVAVVSSALMGTITGSGIANVVTTGQFTIPLMKRFGYKAAFAGGVEATSSMGSQIMPPVM 277
             A++   ++G I+GSG A+        IP M R GY AAF+  V A +   + ++PP +
Sbjct: 93  LAAILVCMVLGGISGSGPADAAAVATVMIPSMARAGYPAAFSASVIAAAGSTAILIPPSI 152

Query: 278 GAVAF-IMAETINVPFVEIAKAALIPACLYFGSVF---WMVHLEAKRSDLKGLPKDQC-P 332
             + + ++    +VP   +  A LIP  L   ++    W + +      + GL   +   
Sbjct: 153 VFILYSVLVPQASVP--ALFAAGLIPGLLAGLALMLPAWWLSVR-HGFGVAGLQDGEARQ 209

Query: 333 SAWGAVKD-SWFLLIPLGVLVYLLFSGRTPLFSGMVGLALTAIVILGSAIILKVSNYALR 391
           S W A+K+ SW LL P+ +L  +     TP  + +V +     V L   +I +  N    
Sbjct: 210 SFWSALKEASWGLLAPVIILGGMRSGAFTPTEAAVVAVFYGLFVGL---VIYRTLN---- 262

Query: 392 CAFWIALGLLCVGFFRLGIGVVFAVIGVLVVACW--FMQGTRETLVICLHALVDGARHAV 449
              W  +  + V    +   VV  +I +  V  W     GT E L   L  L  G   A+
Sbjct: 263 ---WKNIYEVLVESAEVS-AVVMLIIALASVFAWAGSTLGTFEALGGWLVGL-SGNETAI 317

Query: 450 PVGIACALV--GSIIAVVSLTGVASTF-AGYILAIGRDNLLLSLILTMLTCLVLGMGIPT 506
            + +   L+  G  +  VS+  +   F    IL  G D +   +ILTM   + +G   P 
Sbjct: 318 LLAVTLLLLIAGMFLDAVSILFIFMPFLLPVILHFGWDPVWFGVILTM--NVAIGQFTPP 375

Query: 507 IP-NYIITSSIA 517
           +  N ++TS IA
Sbjct: 376 MAINLMVTSRIA 387